Reference on EC 4.2.1.30 - glycerol dehydratase
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REF. 
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Abeles, R.H.
Dehydrations requiring vitamin B12 coenzyme
The Enzymes, 3rd Ed. (Boyer, P. D. , ed. )
5
481-497
1971
Klebsiella pneumoniae, Lactobacillus sp.
-
Poppe, L.; Retey, J.
Kinetic investigations with inhibitors that mimic the posthomolysis intermediate in the reactions of coenzyme-B12-dependent glycerol dehydratase and diol deydratase
Eur. J. Biochem.
245
398-401
1997
Citrobacter freundii
Forage, R.G.; Foster, M.A.
Glycerol fermentation in Klebsiella pneumoniae: functions of the coenzyme B12-dependent glycerol and diol dehydratases
J. Bacteriol.
149
413-419
1982
Klebsiella pneumoniae
Smiley, K.L.; Sobolov, M.
A cobamide-requiring glycerol dehydrase from an acrolein-forming Lactobacillus
Arch. Biochem. Biophys.
97
538-543
1962
Klebsiella pneumoniae, Lactobacillus sp., Lactobacillus sp. 208-A
Schneider, Z.; Larsen, E.G.; Jacobson, G.; Johnson, B.C.; Pawelkiewicz, J.
Purification and properties of glycerol dehydrase
J. Biol. Chem.
245
3388-3396
1970
Klebsiella pneumoniae, Klebsiella pneumoniae PZH 572 Warsaw
Schneider, Z.; Johnson, B.C.
Studies on the thermal dissociation of glycerol dehydrase
Arch. Biochem. Biophys.
144
491-495
1971
Klebsiella pneumoniae, Klebsiella pneumoniae PZH 572 Warsaw
Pawelkiewicz, J.
Determination of cobamide derivates in picomole quantities by means of glycerol dehydrase from Aerobacter aerogenes
Methods Enzymol.
18C
32-34
1971
Klebsiella pneumoniae, Klebsiella pneumoniae PZH 572 Warsaw
-
Stroinski, A.; Pawelkiewicz, J.; Johnson, B.C.
Allosteric interactions in glycerol dehydratase. Purification of enzyme and effects of positive and negative cooperativity for glycerol
Arch. Biochem. Biophys.
162
321-330
1974
Klebsiella pneumoniae, Lactobacillus leichmannii, Klebsiella pneumoniae PZH 572 Warsaw
Johnson, B.C.; Stroinski, A.; Schneider, Z.
Glycerol dehydratase from Aerobacter aerogenes
Methods Enzymol.
42C
315-323
1975
Klebsiella pneumoniae, Klebsiella pneumoniae PZH 572 Warsaw
Yakusheva, M.I.; Poznanskaya, A.A.; Pospelova, T.A.; Rudakova, I.P.; Yurkevich, A.M.; Yakovlev, V.A.
Study on the mechanism of action of adenosylcobalamin-dependent glycerol dehydratase from Aerobacter aerogenes. I. Role of structural components of adenosylcobalamin the formation of the active site of glycerol dehydratase
Biochim. Biophys. Acta
484
216-235
1977
Klebsiella pneumoniae
Toraya, T.; Fukui, S.
Immunochemical evidence for the difference between coenzyme-B12-dependent diol dehydratase and glycerol dehydratase
Eur. J. Biochem.
76
285-289
1977
Citrobacter freundii, Citrobacter intermedius, Klebsiella pneumoniae, Lactobacillus sp.
Poznanskaya, A.A.; Yakusheva, M.I.; Yakolev, V.A.
Study of the mechanism of action of adenosylcobalamindependent glycerol dehydratase from Aerobacter aerogenes. II. The inactivation kinetics of glycerol dehydratase complexes with adenosylobalamin and its analogs
Biochim. Biophys. Acta
484
236-243
1977
Klebsiella pneumoniae, Klebsiella pneumoniae PZH 572 Warsaw
Forage, R.G.; Foster, M.A.
Resolution of the coenzyme B-12-dependent dehydratases of Klebsiella sp. and Citrobacter freundii
Biochim. Biophys. Acta
569
249-258
1979
Citrobacter freundii, Klebsiella pneumoniae
Toraya, T.; Kuno, S.; Fukui, S.
Distribution of coenzyme B12-dependent diol dehydratase and glycerol dehydratase in selected genera of Enterobacteriaceae and Propionibacteriaceae
J. Bacteriol.
141
1439-1442
1980
Citrobacter freundii, Citrobacter intermedius, Klebsiella pneumoniae, Lactobacillus sp.
Honda, S.; Toraya, T.; Fukui, S.
In situ reactivation of glycerol-inactivated coenzyme B12-dependent enzymes, glycerol dehydratase and diol dehydratase
J. Bacteriol.
143
1458-1465
1980
Klebsiella pneumoniae, Klebsiella pneumoniae PZH 572 Warsaw
Slininger, P.J.; Bothast, R.J.; Smiley, K.L.
Production of 3-hydroxypropionaldehyde from glycerol
Appl. Environ. Microbiol.
46
62-67
1983
Lactobacillus sp.
Talarico, T.L.; Dobrogosz, W.J.
Purification and characterization of glycerol dehydratase from Lactobacillus reuteri
Appl. Environ. Microbiol.
56
1195-1197
1990
Klebsiella pneumoniae, Levilactobacillus brevis, Lentilactobacillus buchneri, Limosilactobacillus reuteri
Tobimatsu, T.; Azuma, M.; Matsubara, H.; Takatori, H.; Niida, T.; Nishimoto, K.; Satoh, H.; Hayashi, R.; Toraya, T.
Cloning, sequencing, and high level expression of the genes encoding adenosylcobalamin-dependent glycerol dehydrase of Klebsiella pneumoniae
J. Biol. Chem.
271
22352-22357
1996
Klebsiella pneumoniae
Seyfried, M; Daniel, R.; Gottschalk, G.
Cloning, sequencing, and overexpression of the genes encoding coenzyme B12-dependent glycerol dehydratase of Citrobacter freundii
J. Bacteriol.
178
5793-5796
1996
Citrobacter freundii, Klebsiella pneumoniae, Limosilactobacillus reuteri
Macis, L.; Daniel, R.; Gottschalk, G.
Properties and sequence of the coenzyme B12-dependent glycerol dehydratase of Clostridium pasteurianum
FEMS Microbiol. Lett.
164
21-28
1998
Citrobacter freundii, Clostridium pasteurianum
Daniel, R.; Bobik, T.A.; Gottschalk, G.
Biochemistry of coenzyme B-12-dependent glycerol and diol dehydratases and organization of the encoding genes
FEMS Microbiol. Rev.
22
553-566
1999
Citrobacter freundii, Clostridium butyricum, Clostridium pasteurianum, Klebsiella pneumoniae, Lactobacillus sp., Lentilactobacillus buchneri, Levilactobacillus brevis, Limosilactobacillus reuteri, Pantoea agglomerans
Tobimatsu, T.; Kajiura, H.; Toraya, T.
Specificities of reactivating factors for adenosylcobalamin-dependent diol dehydratase and glycerol dehydratase
Arch. Microbiol.
174
81-88
2000
Klebsiella oxytoca, Klebsiella pneumoniae
O'Brien, J.R.; Raynaud, C.; Croux, C.; Girbal, L.; Soucaille, P.; Lanzilotta, W.N.
Insight into the mechanism of the B12-independent glycerol dehydratase from Clostridium butyricum: preliminary biochemical and structural characterization
Biochemistry
43
4635-4645
2004
Clostridium butyricum
Toraya, T.
Radical catalysis of B12 enzymes: structure, mechanism, inactivation, and reactivation of diol and glycerol dehydratases
Cell. Mol. Life Sci.
57
106-127
2000
Klebsiella oxytoca, Klebsiella pneumoniae
Seifert, C.; Bowien, S.; Gottschalk, G.; Daniel, R.
Identification and expression of the genes and purification and characterization of the gene products involved in reactivation of coenzyme B12-dependent glycerol dehydratase of Citrobacter freundii
Eur. J. Biochem.
268
2369-2378
2001
Citrobacter freundii
Yamanishi, M.; Yunoki, M.; Tobimatsu, T.; Sato, H.; Matsui, J.; Dokiya, A.; Iuchi, Y.; Oe, K.; Suto, K.; Shibata, N.; Morimoto, Y.; Yasuoka, N.; Toraya, T.
The crystal structure of coenzyme B12-dependent glycerol dehydratase in complex with cobalamin and propane-1,2-diol
Eur. J. Biochem.
269
4484-4494
2002
Klebsiella pneumoniae
Poppe, L.; Hull, W.E.; Nitsche, R.; Graf, T.; Stupperich, E.; Retey, J.
(Hydroxyalkyl)cob(III)alamins as competitive inhibitors in coenzyme B12-dependent enzymic reactions. 1H-NMR structure analysis and kinetic studies with glycerol dehydratase and diol dehydratase
Helv. Chim. Acta
82
1250-1265
1999
Klebsiella pneumoniae
-
Tobimatsu, T.; Kajiura, H.; Yunoki, M.; Azuma, M.; Toraya, T.
Identification and expression of the genes encoding a reactivating factor for adenosylcobalamin-dependent glycerol dehydratase
J. Bacteriol.
181
4110-4113
1999
Klebsiella pneumoniae
Kajiura, H.; Mori, K.; Tobimatsu, T.; Toraya, T.
Characterization and mechanism of action of a reactivating factor for adenosylcobalamin-dependent glycerol dehydratase
J. Biol. Chem.
276
36514-36519
2001
Klebsiella pneumoniae
Liao, D.I.; Dotson, G.; Turner, I.Jr.; Reiss, L.; Emptage, M.
Crystal structure of substrate free form of glycerol dehydratase
J. Inorg. Biochem.
93
84-91
2003
Klebsiella pneumoniae
Liao, D.I.; Reiss, L.; Turner, I.; Dotson, G.
Structure of glycerol dehydratase reactivase: a new type of molecular chaperone
Structure
11
109-119
2003
Klebsiella pneumoniae
Lin, R.; Liu, H.; Hao, J.; Cheng, K.; Liu, D.
Enhancement of 1,3-propanediol production by Klebsiella pneumoniae with fumarate addition
Biotechnol. Lett.
27
1755-1759
2005
Klebsiella pneumoniae, Klebsiella pneumoniae M5a1
Andres, S.; Wiezer, A.; Bendfeldt, H.; Waschkowitz, T.; Toeche-Mittler, C.; Daniel, R.
Insights into the genome of the enteric bacterium Escherichia blattae: Cobalamin (B12) biosynthesis, B12-dependent reactions, and inactivation of the gene region encoding B12-dependent glycerol dehydratase by a new Mu-Like prophage
J. Mol. Microbiol. Biotechnol.
8
150-168
2004
Shimwellia blattae
Yamada, S.; Yamada, K.; Nishikawa, N.; Hioki, R.; Nirasawa, M.; Kii, K.; Ryugo, H.; Iwama, M.; Fukuda, M.
Determination of vitamin B12 using the enzyme glycerol dehydrase
Scand. J. Clin. Lab. Invest.
64
185-194
2004
Klebsiella pneumoniae
Wang, F.; Qu, H.; Tian, P.; Tan, T.
Heterologous expression and characterization of recombinant glycerol dehydratase from Klebsiella pneumoniae in Escherichia coli
Biotechnol. J.
2
736-742
2007
Klebsiella pneumoniae
Qi, X.; Sun, L.; Luo, Z.; Wu, J.; Meng, X.; Tang, Y.; Wei, Y.; Huang, R.
Rational design of glycerol dehydratase: Swapping the genes encoding the subunits of glycerol dehydratase to improve enzymatic properties
Chin. Sci. Bull.
51
2977-2985
2006
Citrobacter freundii (A8CH84), Klebsiella pneumoniae (A8CIU9)
-
Kajiura, H.; Mori, K.; Shibata, N.; Toraya, T.
Molecular basis for specificities of reactivating factors for adenosylcobalamin-dependent diol and glycerol dehydratases
FEBS J.
274
5556-5566
2007
Klebsiella oxytoca, Klebsiella pneumoniae
Lehtioe, L.; Grossmann, J.G.; Kokona, B.; Fairman, R.; Goldman, A.
Crystal structure of a glycyl radical enzyme from Archaeoglobus fulgidus
J. Mol. Biol.
357
221-235
2006
Clostridium butyricum
Sakai, T.; Yamasaki, A.; Toyofuku, S.; Nishiki, T.; Yunoki, M.; Komoto, N.; Tobimatsu, T.; Toraya, T.
Construction and characterization of hybrid dehydratases between adenosylcobalamin-dependent diol and glycerol dehydratases
J. Nutr. Sci. Vitaminol.
53
102-108
2007
Klebsiella pneumoniae
Wang, F.; Qu, H.; Zhang, D.; Tian, P.; Tan, T.
Production of 1,3-propanediol from glycerol by recombinant E. coli using incompatible plasmids system
Mol. Biotechnol.
37
112-119
2007
Escherichia coli
Tang, X.; Tan, Y.; Zhu, H.; Zhao, K.; Shen, W.
Microbial conversion of glycerol to 1,3-propanediol by an engineered strain of Escherichia coli
Appl. Environ. Microbiol.
75
1628-1634
2009
Clostridium butyricum (Q8GEZ8), Clostridium butyricum
Andreessen, B.; Lange, A.B.; Robenek, H.; Steinbuechel, A.
Conversion of glycerol to poly(3-hydroxypropionate) in recombinant Escherichia coli
Appl. Environ. Microbiol.
76
622-626
2010
Clostridium butyricum
Wang, X.D.; Zhang, X.E.; Guo, Y.C.; Zhang, Z.P.; Cao, Z.A.; Zhou, Y.F.
Characterization of glycerol dehydratase expressed by fusing its alpha- and beta-subunits
Biotechnol. Lett.
31
711-717
2009
Klebsiella pneumoniae
Sandala, G.M.; Kovacevic, B.; Baric, D.; Smith, D.M.; Radom, L.
On the reaction of glycerol dehydratase with but-3-ene-1,2-diol
Chemistry
15
4865-4873
2009
Citrobacter freundii
Qi, X.; Chen, Y.; Jiang, K.; Zuo, W.; Luo, Z.; Wei, Y.; Du, L.; Wei, H.; Huang, R.; Du, Q.
Saturation-mutagenesis in two positions distant from active site of a Klebsiella pneumoniae glycerol dehydratase identifies some highly active mutants
J. Biotechnol.
144
43-50
2009
Klebsiella pneumoniae, Klebsiella pneumoniae 10018
Xu, X.; Zhang, G.; Wang, L.; Ma, B.; Li, C.
Quantitative analysis on inactivation and reactivation of recombinant glycerol dehydratase from Klebsiella pneumoniae XJPD-Li
J. Mol. Catal. B
56
108-114
2009
Klebsiella pneumoniae (Q59475 and A6NA24 and A6NA25), Klebsiella pneumoniae XJPD-Li (Q59475 and A6NA24 and A6NA25)
-
Zhang, G.; Xu, X.; Li, C.; Ma, B.
Cloning, expression and reactivating characterization of glycerol dehydratase reactivation factor from Klebsiella pneumoniae XJPD-Li
World J. Microbiol. Biotechnol.
25
1947-1953
2009
Klebsiella pneumoniae, Klebsiella pneumoniae XJPD-Li
-
Xu, X.; Zhang, G.; Lv, B.; Yuan, Y.; Li, C.
Recombinant glycerol dehydratase from Klebsiella pneumonia XJPD-Li: induction optimization, purification and characterization
Appl. Biochem. Microbiol.
47
144-150
2011
Klebsiella pneumoniae (A6NA24), Klebsiella pneumoniae (A6NA25), Klebsiella pneumoniae (Q59475), Klebsiella pneumoniae XJPD-Li (A6NA24), Klebsiella pneumoniae XJPD-Li (A6NA25), Klebsiella pneumoniae XJPD-Li (Q59475)
-
Demick, J.M.; Lanzilotta, W.N.
Radical SAM activation of the B12-independent glycerol dehydratase results in formation of 5-deoxy-5-(methylthio)adenosine and not 5-deoxyadenosine
Biochemistry
50
440-442
2011
Clostridium butyricum
Escobar, A.J.; Castano, D.M.
Classifying glycerol dehydratase by its functional residues and purifying selection in its evolution
Bioinformation
5
173-176
2010
Clostridium butyricum (A9LAS8), Clostridium butyricum IBUN 158B (A9LAS8)
Qi, X.; Deng, W.; Wang, F.; Guo, Q.; Chen, H.; Wang, L.; He, X.; Huang, R.
Molecular cloning, co-expression, and characterization of glycerol dehydratase and 1,3-propanediol dehydrogenase from Citrobacter freundii
Mol. Biotechnol.
54
469-474
2013
Citrobacter freundii (A8CH84 and A8CH91 and A8CH95), Citrobacter freundii, Citrobacter freundii AS1.1732 (A8CH84 and A8CH91 and A8CH95)
Qi, X.; Guo, Q.; Wei, Y.; Xu, H.; Huang, R.
Enhancement of pH stability and activity of glycerol dehydratase from Klebsiella pneumoniae by rational design
Biotechnol. Lett.
34
339-346
2012
Klebsiella pneumoniae (A8CIU9), Klebsiella pneumoniae, Klebsiella pneumoniae 10018 (A8CIU9)
Liu, Y.; Gallo, A.A.; Xu, W.; Bajpai, R.; Florian, J.
CHpi interactions do not contribute to hydrogen transfer catalysis by glycerol dehydratase
J. Phys. Chem. A
115
11162-11166
2011
Clostridium butyricum
Feliks, M.; Ullmann, G.M.
Glycerol dehydratation by the B12-independent enzyme may not involve the migration of a hydroxyl group: a computational study
J. Phys. Chem. B
116
7076-7087
2012
Clostridium butyricum (Q8GEZ8)
Lim, H.G.; Noh, M.H.; Jeong, J.H.; Park, S.; Jung, G.Y.
Optimum rebalancing of the 3-hydroxypropionic acid production pathway from glycerol in Escherichia coli
ACS Synth. Biol.
5
1247-1255
2016
Klebsiella pneumoniae (Q59476 AND O08505 AND Q59475)
Jiang, W.; Li, W.; Hong, Y.; Wang, S.; Fang, B.
Cloning, expression, mutagenesis library construction of glycerol dehydratase, and binding mode simulation of its reactivase with ligands
Appl. Biochem. Biotechnol.
178
739-752
2016
Klebsiella pneumoniae (Q59476 AND O08505 AND Q59475), Klebsiella pneumoniae, Klebsiella pneumoniae DSM 2026 (Q59476 AND O08505 AND Q59475)
Durgapal, M.; Kumar, V.; Yang, T.H.; Lee, H.J.; Seung, D.; Park, S.
Production of 1,3-propanediol from glycerol using the newly isolated Klebsiella pneumoniae J2B
Bioresour. Technol.
159
223-231
2014
Klebsiella pneumoniae (Q59476 AND O08505 AND Q59475), Klebsiella pneumoniae J2B (Q59476 AND O08505 AND Q59475)
Hong, E.; Kim, J.; Ha, S.; Ryu, Y.
Improved 1,3-propanediol production by Escherichia coli from glycerol due to co-expression of glycerol dehydratase reactivation factors and succinate addition
Biotechnol. Bioprocess Eng.
20
849-855
2015
Klebsiella pneumoniae (Q59476 AND O08505 AND Q59475)
Maddock, D.J.; Gerth, M.L.; Patrick, W.M.
An engineered glycerol dehydratase with improved activity for the conversion of meso-2,3-butanediol to butanone
Biotechnol. J.
12
1700480
2017
Klebsiella pneumoniae (Q59476 AND O08505 AND Q59475), Klebsiella pneumoniae
Jiang, W.; Wang, S.; Yang, Z.; Fang, B.
B12-independent glycerol dehydratase and its reactivase from Clostridia butyricum Optimizing cloning by uniform design logic
Eng. Life Sci.
15
519-524
2015
Clostridium butyricum (Q8GEZ8 AND Q8GEZ7), Clostridium butyricum VPI 1718 (Q8GEZ8 AND Q8GEZ7)
-
Park, E.S.; Park, S.; Shin, J.S.
Spectrophotometric assay for sensitive detection of glycerol dehydratase activity using aldehyde dehydrogenase
J. Biosci. Bioeng.
123
528-533
2017
Klebsiella pneumoniae (Q59476 AND O08505 AND Q59475), Klebsiella pneumoniae DSM 2026 (Q59476 AND O08505 AND Q59475)
Sankaranarayanan, M.; Seol, E.; Kim, Y.; Chauhan, A.S.; Park, S.
Measurement of crude-cell-extract glycerol dehydratase activity in recombinant Escherichia coli using coupled-enzyme reactions
J. Ind. Microbiol. Biotechnol.
44
477-488
2017
Klebsiella pneumoniae (Q59476 AND O08505 AND Q59475)
Tokuyama, K.; Ohno, S.; Yoshikawa, K.; Hirasawa, T.; Tanaka, S.; Furusawa, C.; Shimizu, H.
Increased 3-hydroxypropionic acid production from glycerol, by modification of central metabolism in Escherichia coli
Microb. Cell Fact.
13
64
2014
Klebsiella pneumoniae (Q59476 AND O08505 AND Q59475)
Dishisha, T.; Pereyra, L.P.; Pyo, S.H.; Britton, R.A.; Hatti-Kaul, R.
Flux analysis of the Lactobacillus reuteri propanediol-utilization pathway for production of 3-hydroxypropionaldehyde, 3-hydroxypropionic acid and 1,3-propanediol from glycerol
Microb. Cell Fact.
13
76
2014
Limosilactobacillus reuteri (A5VMB2), Limosilactobacillus reuteri DSM 20016 (A5VMB2)
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