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agar + H2O
neoagarobiose + ?
-
-
-
-
?
agar + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
agar + H2O
neoagarohexaose + neoagarotetraose
agar + H2O
neoagarooctaose + neoagarohexaose + neoagarotetraose
-
-
-
?
agar + H2O
neoagarotetraose + neoagarohexaose
agaropectin + H2O
?
-
-
-
-
ir
agarose + H2O
2 neoagarooligosaccharides
rAgaC with low activity (0.05 U/ml) cleaves agarose into longer neoagarooligosaccharides. When activity is increased to 30 U/ml, neoagarooctaose is produced predominantly in addition to neoagarohexaose and neoagarotetraose
-
-
?
agarose + H2O
agarotetraose + ?
agarose + H2O
neoagarobiose
agarose + H2O
neoagarobiose + neoagarotetraose
agarose + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
agarose + H2O
neoagarohexaose + neoagarotetraose
agarose + H2O
neoagarohexaose + neoagarotetraose + neoagarobiose
agarose + H2O
neoagarooctaose + ?
agarose + H2O
neoagarooctaose + neoagarodecaose
agarose + H2O
neoagarosebiose
agarose + H2O
neoagarotetraose
agarose + H2O
neoagarotetraose + ?
agarose + H2O
neoagarotetraose + neoagarobiose
agarose + H2O
neoagarotetraose + neoagarohexaose
agarose + H2O
neoagarotetraose + neoagarohexaose + neoagarobiose
agarose + H2O
neoagarotetraose + neoagarohexaose + neoagarooctaose
alginate + H2O
?
-
-
-
-
?
alkali treated porphyran + H2O
?
carboxymethyl cellulose + H2O
?
carrageenan + H2O
?
-
-
-
-
?
Gracilaria lemaneiformis + H2O
neoagarobiose + neoagarotetraose
-
-
-
-
?
liquid-phase agarose + H2O
?
-
-
-
-
?
neoagaro-oligosaccharides + H2O
?
-
from N2 to N22, reaction yield for neoagaro-oligosaccharides is 52.7% by 4 U/mg beta-agarase
-
-
?
neoagarodecaose + H2O
?
is a very poor substrate
-
-
?
neoagarodecaose + H2O
neoagarobiose
neoagarododecaose + H2O
?
-
-
-
?
neoagarododecaose + H2O
neoagarohexaose + neoagarotetraose + neoagarooctaose
-
-
-
?
neoagarohexaitol + H2O
?
-
-
-
-
ir
neoagarohexaose + H2O
neoagarobiose
neoagarohexaose + H2O
neoagarobiose + neoagarotetraose
neoagarohexaose + H2O
neoagarotetraose + neoagarobiose
neoagarooctaose + H2O
neoagarobiose
neoagarooctaose + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
-
-
-
?
neoagarooctaose + H2O
neoagarohexaose + neoagarobiose
neoagarooctaose + H2O
neoagarohexaose + neoagarotetraose + neoagarobiose
neoagarooctaose + H2O
neoagarotetraose
neoagarotetradecaose + H2O
?
-
-
-
?
neoagarotetraose + H2O
neoagarobiose
polysaccharides with neoagarobiose units + H2O
neoagarobiose + neoagarotetraose
-
-
-
-
ir
porphyran + H2O
neoagaro-oligosaccharides
porphyran + H2O
neoagarohexaose + neoagarotetraose
porphyran + H2O
neoagarooctaose + neoagarohexaose + neoagarotetraose
-
-
-
?
additional information
?
-
agar + H2O
?
-
-
-
-
?
agar + H2O
?
-
100% activity, the viscosity of the inoculated agar medium decreases by more than 60% after 20 h cultivation
-
-
?
agar + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
-
-
-
-
?
agar + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
-
-
-
-
?
agar + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
-
the enzyme degrades agarose into neoagarooligosaccharides. The neoagarooligosaccharides have various special biological activities, such as inhibition of bacterial growth, slowing down of starch degradation thereby reducing the calorific value of food, and providing anticancer, antivirus, and anti-oxidation activities
-
-
?
agar + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
-
the enzyme releases degradation products in the order of neoagarohexose, neoagarotetraose and small quantity of neoagarobiose
-
-
?
agar + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
-
the enzyme degrades agarose into neoagarooligosaccharides. The neoagarooligosaccharides have various special biological activities, such as inhibition of bacterial growth, slowing down of starch degradation thereby reducing the calorific value of food, and providing anticancer, antivirus, and anti-oxidation activities
-
-
?
agar + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
-
the enzyme releases degradation products in the order of neoagarohexose, neoagarotetraose and small quantity of neoagarobiose
-
-
?
agar + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
-
-
-
-
?
agar + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
-
-
-
?
agar + H2O
neoagarohexaose + neoagarotetraose
-
-
-
-
?
agar + H2O
neoagarohexaose + neoagarotetraose
-
-
-
?
agar + H2O
neoagarotetraose + neoagarohexaose
-
-
main products
-
?
agar + H2O
neoagarotetraose + neoagarohexaose
-
-
main products
-
?
agarose + H2O
?
-
-
-
?
agarose + H2O
?
-
-
-
-
?
agarose + H2O
?
-
-
-
-
?
agarose + H2O
?
-
157% activity compared to agar
-
-
?
agarose + H2O
?
-
-
-
-
?
agarose + H2O
?
-
-
-
-
?
agarose + H2O
agarotetraose + ?
-
-
-
-
?
agarose + H2O
agarotetraose + ?
-
-
-
-
?
agarose + H2O
neoagarobiose
-
-
-
-
?
agarose + H2O
neoagarobiose
-
-
-
-
?
agarose + H2O
neoagarobiose
-
-
-
-
ir
agarose + H2O
neoagarobiose
-
-
-
-
ir
agarose + H2O
neoagarobiose
-
-
-
?
agarose + H2O
neoagarobiose
-
-
-
?
agarose + H2O
neoagarobiose
-
Aga50D has unique exo-lytic activity and is able to produce neoagarobiose directly from agarose
-
-
?
agarose + H2O
neoagarobiose
-
Aga50D has unique exo-lytic activity and is able to produce neoagarobiose directly from agarose
-
-
?
agarose + H2O
neoagarobiose + neoagarotetraose
-
-
about 75% neoagarobiose plus 25% neoagarotetraose
-
?
agarose + H2O
neoagarobiose + neoagarotetraose
-
-
about 75% neoagarobiose plus 25% neoagarotetraose
-
?
agarose + H2O
neoagarobiose + neoagarotetraose
-
main hydrolytic products
-
?
agarose + H2O
neoagarobiose + neoagarotetraose
-
main hydrolytic products
-
?
agarose + H2O
neoagarobiose + neoagarotetraose
-
-
-
-
?
agarose + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
-
-
-
?
agarose + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
-
specific substrate
main products
-
?
agarose + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
-
specific substrate
main products
-
?
agarose + H2O
neoagarobiose + neoagarotetraose + neoagarohexaose
-
-
-
?
agarose + H2O
neoagarohexaose + neoagarotetraose
-
-
-
?
agarose + H2O
neoagarohexaose + neoagarotetraose
-
-
-
?
agarose + H2O
neoagarohexaose + neoagarotetraose
-
-
-
-
?
agarose + H2O
neoagarohexaose + neoagarotetraose
-
-
-
?
agarose + H2O
neoagarohexaose + neoagarotetraose + neoagarobiose
-
an endo type glycosidase, which specifically cleaves beta-1,4 linkages found in agarose
neoagarobiose is the final hydrolysis product
-
?
agarose + H2O
neoagarohexaose + neoagarotetraose + neoagarobiose
-
an endo type glycosidase, which specifically cleaves beta-1,4 linkages found in agarose
neoagarobiose is the final hydrolysis product
-
?
agarose + H2O
neoagarooctaose + ?
-
main product (26.7% of total products)
-
?
agarose + H2O
neoagarooctaose + ?
-
main product (26.7% of total products)
-
?
agarose + H2O
neoagarooctaose + neoagarodecaose
-
-
major products
-
?
agarose + H2O
neoagarooctaose + neoagarodecaose
-
AgaB hydrolyzes the glycosylic bond with inversion of anomeric configuration
-
-
?
agarose + H2O
neoagarooctaose + neoagarodecaose
-
-
-
-
?
agarose + H2O
neoagarooctaose + neoagarodecaose
-
-
-
?
agarose + H2O
neoagarosebiose
-
-
main product
-
?
agarose + H2O
neoagarosebiose
-
-
main product
-
?
agarose + H2O
neoagarotetraose
-
-
-
-
?
agarose + H2O
neoagarotetraose
-
-
-
-
ir
agarose + H2O
neoagarotetraose
-
-
-
-
?
agarose + H2O
neoagarotetraose
-
-
-
-
?
agarose + H2O
neoagarotetraose
-
-
-
-
ir
agarose + H2O
neoagarotetraose
-
-
-
-
ir
agarose + H2O
neoagarotetraose
-
-
-
?
agarose + H2O
neoagarotetraose
-
-
-
?
agarose + H2O
neoagarotetraose
-
-
-
-
ir
agarose + H2O
neoagarotetraose
-
-
-
-
ir
agarose + H2O
neoagarotetraose
-
-
-
?
agarose + H2O
neoagarotetraose
-
-
-
-
ir
agarose + H2O
neoagarotetraose
-
-
-
?
agarose + H2O
neoagarotetraose
-
-
-
-
ir
agarose + H2O
neoagarotetraose
-
-
-
?
agarose + H2O
neoagarotetraose
Pseudomonas-like bacterium
-
-
-
-
ir
agarose + H2O
neoagarotetraose
-
-
-
-
ir
agarose + H2O
neoagarotetraose
-
-
-
-
ir
agarose + H2O
neoagarotetraose
-
-
-
-
ir
agarose + H2O
neoagarotetraose
-
-
-
?
agarose + H2O
neoagarotetraose
-
-
plus small amounts of neoagarohexaose and neoagarobiose
-
?
agarose + H2O
neoagarotetraose
-
-
-
?
agarose + H2O
neoagarotetraose
-
-
-
-
?
agarose + H2O
neoagarotetraose
-
-
-
?
agarose + H2O
neoagarotetraose
-
-
-
-
?
agarose + H2O
neoagarotetraose + ?
-
-
main product
-
?
agarose + H2O
neoagarotetraose + ?
-
-
main product
-
?
agarose + H2O
neoagarotetraose + ?
-
-
main product
-
?
agarose + H2O
neoagarotetraose + ?
-
-
main product
-
?
agarose + H2O
neoagarotetraose + neoagarobiose
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarobiose
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarobiose
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarobiose
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarobiose
-
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarobiose
-
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarobiose
-
agarase I, principal enzyme
-
-
?
agarose + H2O
neoagarotetraose + neoagarobiose
-
agarase I, principal enzyme
-
-
?
agarose + H2O
neoagarotetraose + neoagarobiose
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarobiose
-
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
the recombinant enzyme hydrolyzes the beta-1,4-glycosidic linkages of agarose, yielding neoagarotetraose and neoagarohexaose as the main products
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
-
neoagarotetraose and neoagarohexaose are the major products, neoagarooctaose is also observed as a minor end product
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
-
neoagarotetraose and neoagarohexaose are the major products, neoagarooctaose is also observed as a minor end product
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
47% neoagarotetraose and 45% neoagarotetraose
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
predominant products
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
-
main hydrolysates of agarose by agarase AG-a are neoagarotetraose (48%), neoagarohexaose (50%), and neoagarobiose (2%)
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
-
main hydrolysates of agarose by agarase AG-a are neoagarotetraose (48%), neoagarohexaose (50%), and neoagarobiose (2%)
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose + neoagarobiose
-
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose + neoagarobiose
-
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose + neoagarooctaose
-
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose + neoagarooctaose
-
-
-
-
?
agarose + H2O
neoagarotetraose + neoagarohexaose + neoagarooctaose
-
-
-
-
?
alkali treated porphyran + H2O
?
-
-
-
-
?
alkali treated porphyran + H2O
?
-
-
-
-
ir
carboxymethyl cellulose + H2O
?
-
-
-
-
?
carboxymethyl cellulose + H2O
?
-
-
-
-
?
chitin + H2O
?
-
-
-
-
?
neoagarodecaose + H2O
neoagarobiose
-
-
-
?
neoagarodecaose + H2O
neoagarobiose
-
-
-
?
neoagarohexaose + H2O
?
-
-
-
-
?
neoagarohexaose + H2O
?
poor substrate
-
-
?
neoagarohexaose + H2O
neoagarobiose
-
-
-
-
?
neoagarohexaose + H2O
neoagarobiose
-
-
-
-
?
neoagarohexaose + H2O
neoagarobiose
-
-
-
-
?
neoagarohexaose + H2O
neoagarobiose
-
-
-
-
?
neoagarohexaose + H2O
neoagarobiose
-
-
-
?
neoagarohexaose + H2O
neoagarobiose
-
-
-
?
neoagarohexaose + H2O
neoagarobiose + neoagarotetraose
-
-
-
-
ir
neoagarohexaose + H2O
neoagarobiose + neoagarotetraose
-
-
-
?
neoagarohexaose + H2O
neoagarotetraose + neoagarobiose
-
-
-
?
neoagarohexaose + H2O
neoagarotetraose + neoagarobiose
-
-
-
?
neoagarohexaose + H2O
neoagarotetraose + neoagarobiose
-
-
-
-
?
neoagarohexaose + H2O
neoagarotetraose + neoagarobiose
-
-
-
-
?
neoagarohexaose + H2O
neoagarotetraose + neoagarobiose
-
-
-
-
?
neoagarooctaose + H2O
neoagarobiose
-
-
-
?
neoagarooctaose + H2O
neoagarobiose
-
-
-
?
neoagarooctaose + H2O
neoagarohexaose + neoagarobiose
-
-
-
ir
neoagarooctaose + H2O
neoagarohexaose + neoagarobiose
Pseudomonas-like bacterium
-
-
beta-agarase I
ir
neoagarooctaose + H2O
neoagarohexaose + neoagarotetraose + neoagarobiose
-
-
-
-
?
neoagarooctaose + H2O
neoagarohexaose + neoagarotetraose + neoagarobiose
-
-
-
?
neoagarooctaose + H2O
neoagarotetraose
-
-
-
-
ir
neoagarooctaose + H2O
neoagarotetraose
Pseudomonas-like bacterium
-
-
beta-agarose IIb
ir
neoagarotetraose + H2O
neoagarobiose
-
-
-
-
?
neoagarotetraose + H2O
neoagarobiose
-
-
-
-
?
neoagarotetraose + H2O
neoagarobiose
-
-
-
-
?
neoagarotetraose + H2O
neoagarobiose
-
-
-
-
?
neoagarotetraose + H2O
neoagarobiose
-
-
-
-
?
neoagarotetraose + H2O
neoagarobiose
-
-
-
?
neoagarotetraose + H2O
neoagarobiose
-
-
-
?
porphyran + H2O
neoagaro-oligosaccharides
-
-
methylated, sulfated or unsubstituted
ir
porphyran + H2O
neoagaro-oligosaccharides
-
-
methylated, sulfated or unsubstituted
ir
porphyran + H2O
neoagaro-oligosaccharides
-
-
methylated, sulfated or unsubstituted
ir
porphyran + H2O
neoagaro-oligosaccharides
-
-
methylated, sulfated or unsubstituted
ir
porphyran + H2O
neoagaro-oligosaccharides
-
-
methylated, sulfated or unsubstituted
ir
porphyran + H2O
neoagaro-oligosaccharides
-
-
-
-
?
porphyran + H2O
neoagarohexaose + neoagarotetraose
-
-
-
-
?
porphyran + H2O
neoagarohexaose + neoagarotetraose
-
-
-
?
xylan + H2O
?
-
-
-
-
?
additional information
?
-
-
no substrate: kappa-carrageenan, alginate, cellulose, carboxymethyl cellulose
-
-
?
additional information
?
-
-
alpha-1,3-glycosidase activity is not detected
-
-
?
additional information
?
-
-
no substrate: kappa-carrageenan, alginate, cellulose, carboxymethyl cellulose
-
-
?
additional information
?
-
-
alpha-1,3-glycosidase activity is not detected
-
-
?
additional information
?
-
-
no substrate: alginate, carboxymethyl cellulose, fucoidan, kappa-carrageenan, lambda-carrageenan
-
-
?
additional information
?
-
neoagarotetraose can not be further hydrolyzed into neoagarobiose even after long incubation time
-
-
?
additional information
?
-
-
no substrate: alginate, carboxymethyl cellulose, fucoidan, kappa-carrageenan, lambda-carrageenan
-
-
?
additional information
?
-
neoagarotetraose can not be further hydrolyzed into neoagarobiose even after long incubation time
-
-
?
additional information
?
-
-
neoagarotetraose can not be further hydrolyzed into neoagarobiose even after long incubation time
-
-
?
additional information
?
-
when neoagarotetraose and neoagarohexaose are used as substrates for AgaA, no hydrolysis products are detected
-
-
?
additional information
?
-
-
the purified agarase fails to carboxymethyl-cellulose, dextran, soluble starch, pectin, and polygalacturonic acid
-
-
?
additional information
?
-
-
the purified agarase fails to carboxymethyl-cellulose, dextran, soluble starch, pectin, and polygalacturonic acid
-
-
?
additional information
?
-
-
the agarase can saccharify Gelidium amansii directly, with an efficiency about half that compared with agar saccharification (47% activity compared to agar)
-
-
?
additional information
?
-
recombinant AgrP does not hydrolyze neoagarotetraose
-
-
?
additional information
?
-
the agarase AgaB appears to have a large substrate binding cleft that accommodates 12 sugar units, with 8 sugar units toward the reducing end spanning subsites +1 to +8 and 4 sugar units toward the non-reducing end spanning subsites -4 to -1, and enzymatic cleavage taking place between subsites -1 and +1. The enzyme hydrolyzes the glycosidic bond with inversion of anomeric configuration. AgaB does not hydrolyze neoagarooctaose, kappa-carrageenan, lota-carrageenan, lambda-carrageenan, alginate, and chitosan
-
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?
additional information
?
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carbohydrate binding modules of both isoforms Aga16B and Aga86E bind specifically to the non-reducing end of agarose chains, recognizing only the first repeat of the dissaccharide. The carbohydrate binding module targets the equatorial O4 and the axial O3 of the anhydro-L-galactose moiety
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?
additional information
?
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no substrate: neoagarotetraose, kappa-carrageenan
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?
additional information
?
-
no substrate: neoagarotetraose, neoagarobiose, kappa-carrageenan
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?
additional information
?
-
cannot hydrolyze neoagarooctaose and smaller neoagarooligosaccharides nor kappa-carrageenan
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additional information
?
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cannot hydrolyze neoagarooctaose and smaller neoagarooligosaccharides nor kappa-carrageenan
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?
additional information
?
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does not act on neoagarotetraose and neoagarobiose and kappa-carrageenan
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Pseudoalteromonas sp.
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Minegishi, H.; Shimane, Y.; Echigo, A.; Ohta, Y.; Hatada, Y.; Kamekura, M.; Maruyama, T.; Usami, R.
Thermophilic and halophilic beta-agarase from a halophilic archaeon Halococcus sp. 197A
Extremophiles
17
931-939
2013
Halococcus sp., Halococcus sp. 197A
brenda
Ariga, O.; Inoue, T.; Kubo, H.; Minami, K.; Nakamura, M.; Iwai, M.; Moriyama, H.; Yanagisawa, M.; Nakasaki, K.
Cloning of agarase gene from non-marine agarolytic bacterium Cellvibrio sp.
J. Microbiol. Biotechnol.
22
1237-1244
2012
Cellvibrio sp. (B3IXL6), Cellvibrio sp., Cellvibrio sp. OA-2007 (B3IXL6)
brenda
Lee, D.G.; Jeon, M.J.; Lee, S.H.
Cloning, expression, and characterization of a glycoside hydrolase family 118 beta-agarase from Agarivorans sp. JA-1
J. Microbiol. Biotechnol.
22
1692-1697
2012
Agarivorans sp. (K7WTF8), Agarivorans sp. JA-1 (K7WTF8)
brenda
Li, J.; Hu, Q.; Li, Y.; Xu, Y.
Purification and characterization of cold-adapted beta-agarase from an antarctic psychrophilic strain
Braz. J. Microbiol.
46
683-690
2015
Pseudoalteromonas sp. NJ21
brenda
Li, R.K.; Chen, Z.; Ying, X.J.; Ng, T.B.; Ye, X.Y.
A novel GH16 beta-agarase isolated from a marine bacterium, Microbulbifer sp. BN3 and its characterization and high-level expression in Pichia pastoris
Int. J. Biol. Macromol.
119
1164-1170
2018
Microbulbifer sp. BN3
brenda
An, K.; Shi, X.; Cui, F.; Cheng, J.; Liu, N.; Zhao, X.; Zhang, X.H.
Characterization and overexpression of a glycosyl hydrolase family 16 beta-agarase YM01-1 from marine bacterium Catenovulum agarivorans YM01T
Protein Expr. Purif.
143
1-8
2018
Catenovulum agarivorans (A0A286PT85), Catenovulum agarivorans YM01 (A0A286PT85), Catenovulum agarivorans YM01
brenda