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IUBMB CommentsRequires Mn2+ or Mg2+ for activity. Unlike EC 1.1.1.41, isocitrate dehydrogenase (NAD+), oxalosuccinate can be used as a substrate. In eukaryotes, isocitrate dehydrogenase exists in two forms: an NAD+-linked enzyme found only in mitochondria and displaying allosteric properties, and a non-allosteric, NADP+-linked enzyme that is found in both mitochondria and cytoplasm . The enzyme from some species can also use NAD+ but much more slowly [6,7].
Synonyms
isocitrate dehydrogenase 1, nadp-isocitrate dehydrogenase, nadp-dependent isocitrate dehydrogenase, isocitrate dehydrogenase-1, nadp-icdh, nadp-idh, nadp+-dependent isocitrate dehydrogenase, nadp-linked isocitrate dehydrogenase, nadp-specific isocitrate dehydrogenase, nadp+-specific isocitrate dehydrogenase,
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cytosolic isocitrate dehydrogenase 1
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cytosolic NADP(+)-dependent isocitrate dehydrogenase
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cytosolic NADP+-dependent isocitrate dehydrogenase
cytosolic NADP-dependent isocitrate dehydrogenase
cytosolic NADPH-dependent isocitrate dehydrogenase
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isocitrate dehydrogenase (NADP)
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isocitrate dehydrogenase (NADP-dependent)
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isocitrate dehydrogenase (nicotinamide adenine dinucleotide phosphate)
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isocitrate dehydrogenase 1
isocitrate dehydrogenase 2
isocitrate dehydrogenase-1
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mitochondrial NADP+-dependent isocitrate dehydrogenase
NAD+-dependent isocitrate dehydrogenase
NADP isocitric dehydrogenase
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NADP+ dependent isocitrate dehydrogenase
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NADP+-dependent Ds-threo-isocitrate dehydrogenase
Q8X277
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NADP+-dependent Ds-threo-isocitrate:NADP+ oxidoreductase
Q8X277
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NADP+-dependent isocitrate dehydrogenase
NADP+-isocitrate dehydrogenase
NADP+-linked isocitrate dehydrogenase
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NADP+-specific ICDH
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NADP+-specific isocitrate dehydrogenase
NADP-dependent isocitrate dehydrogenase
NADP-dependent isocitric dehydrogenase
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NADP-isocitrate dehydrogenase
NADP-linked isocitrate dehydrogenase
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NADP-specific isocitrate dehydrogenase
NADPH-dependent isocitrate dehydrogenase
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oxalosuccinate decarboxylase
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oxalsuccinic decarboxylase
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cICDH

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cytosolic NADP+-dependent isocitrate dehydrogenase

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cytosolic NADP+-dependent isocitrate dehydrogenase
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cytosolic NADP-dependent isocitrate dehydrogenase

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cytosolic NADP-dependent isocitrate dehydrogenase
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ICD

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ICDH

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ICDH-1

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IDH

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IDH-I

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IDH-IIa

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IDH-IIb

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IDH1

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IDH2

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IDP

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IDP1

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IDP2

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IDP3

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IDPc

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IDPm

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isocitrate dehydrogenase

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isocitrate dehydrogenase
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isocitrate dehydrogenase
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isocitrate dehydrogenase
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isocitrate dehydrogenase
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isocitrate dehydrogenase
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isocitrate dehydrogenase
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isocitrate dehydrogenase
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isocitrate dehydrogenase 1

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isocitrate dehydrogenase 1
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isocitrate dehydrogenase 1
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isocitrate dehydrogenase 2

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isocitrate dehydrogenase 2
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isocytrate deyhdrogenase

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isocytrate deyhdrogenase
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mitochondrial NADP+-dependent isocitrate dehydrogenase

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mitochondrial NADP+-dependent isocitrate dehydrogenase
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mitochondrial NADP+-dependent isocitrate dehydrogenase
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NAD+-dependent isocitrate dehydrogenase

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NAD+-dependent isocitrate dehydrogenase
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NADP+-dependent IDH

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NADP+-dependent IDH
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NADP+-dependent isocitrate dehydrogenase

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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-dependent isocitrate dehydrogenase
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NADP+-ICDH

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NADP+-ICDH
belongs to a mutli-isoenzyme family
NADP+-IDH

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NADP+-isocitrate dehydrogenase

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NADP+-isocitrate dehydrogenase
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NADP+-isocitrate dehydrogenase
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NADP+-isocitrate dehydrogenase
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NADP+-isocitrate dehydrogenase
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NADP+-specific IDH

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NADP+-specific isocitrate dehydrogenase

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NADP+-specific isocitrate dehydrogenase
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NADP+-specific isocitrate dehydrogenase
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NADP+-specific isocitrate dehydrogenase
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NADP+-specific isocitrate dehydrogenase
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NADP+-specific isocitrate dehydrogenase
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NADP+-specific isocitrate dehydrogenase
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NADP+-specific isocitrate dehydrogenase
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NADP+-specific isocitrate dehydrogenase
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NADP-dependent IDH

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NADP-dependent isocitrate dehydrogenase

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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
Q8X277
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-dependent isocitrate dehydrogenase
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NADP-ICDH

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NADP-IDH

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NADP-isocitrate dehydrogenase

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NADP-isocitrate dehydrogenase
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NADP-isocitrate dehydrogenase
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NADP-isocitrate dehydrogenase
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NADP-isocitrate dehydrogenase
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NADP-isocitrate dehydrogenase
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NADP-isocitrate dehydrogenase
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NADP-isocitrate dehydrogenase
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NADP-isocitrate dehydrogenase
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NADP-isocitrate dehydrogenase
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NADP-specific isocitrate dehydrogenase

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NADP-specific isocitrate dehydrogenase
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NADP-specific isocitrate dehydrogenase
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NADP-specific isocitrate dehydrogenase
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NADP-specific isocitrate dehydrogenase
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TM1148

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YlIDP

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isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+
isocitrate + NADP+ = oxalosuccinate + NADPH + H+
(1a)
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oxalosuccinate = 2-oxoglutarate + CO2
(1b)
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isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+

active site structure and reaction mechanism, conformational changes at the active site resulting in closed and open forms, regulatory residues are isocitrate-binding Asp279and Ser94
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isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+
active site structure contains a well-ordered Mn2+-isocitrate complex, reaction mechanism
isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+
Ser95, Asn97, and Thr78 are important for the catalysis having distinguishable functions, overview
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isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+
Tyr140 and Lys212 are required for catalytic activity, Tyr140 is the general acid that protonates the substrate after decarboxylation, Lys212 lowers as a positively charged residue the pK of the nearby ionizable group in the enzyme-substrate complex and stabilizes the carbanion formed initially on substrate decarboxylation
isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+
overall reaction
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isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+
protonation of the enolate to form product 2-oxoglutarate is the rate-limiting step
isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+
overall reaction, catalytic mechanism, overview. The catalysis proceeds in three steps: (1) NADP+ reduction by the isocitrate substrate with the help of the Lys212B base, (2) beta-decarboxylation of the resulting oxalosuccinate, generating an enolate, and (3) protonation of this intermediate by Tyr139A, giving rise to the 2-oxooglutarate product. The beta-decarboxylation of oxalosuccinate is the most likely rate-limiting step. Role of Mg2+ and Asp275A, whose acid/base properties throughout the catalytic cycle lower the barrier to physiologically competent values. The catalysis takes place in a closed-conformation quaternary complex and involves significant conformational changes as the divalent metal (Mg2+ or Mn2+), the NADP+ cofactor, and the trianionic form of the isocitrate substrate (ICT) sequentially bind
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isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+
protonation of the enolate to form product 2-oxoglutarate is the rate-limiting step
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(2R,3S)-isocitrate + NAD+
2-oxoglutarate + CO2 + NADH
(2R,3S)-isocitrate + NADP+
2-oxoglutarate + CO2 + NADPH
2-oxoglutarate + CO2 + NADPH
isocitrate + NADP+
2-oxoglutarate + CO2 + NADPH + H+
isocitrate + NADP+
2-oxoglutarate + NADPH + H+
2-hydroxyglutarate + NADP+
the reaction is catalyzed by mutant enzymes R153H and R153C
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2-oxoglutarate + NADPH + H+
D-2-hydroxyglutarate + NADP+
3-fluoroisocitrate + NADP+
3-fluoro-2-oxoglutarate + NADPH + CO2
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3-hydroxyisocitrate + NADP+
3-hydroxy-2-oxoglutarate + NADPH + CO2
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D-isocitrate + NADP+
2-oxoglutarate + CO2 + NADPH
D-isocitrate + NADP+
2-oxoglutarate + CO2 + NADPH + H+
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DL-isocitrate + NAD+
2-oxoglutarate + CO2 + NADH
DL-isocitrate + NAD+
2-oxoglutarate + CO2 + NADH + H+
DL-isocitrate + NADP+
2-oxoglutarate + CO2 + NADPH
DL-isocitrate + NADP+
2-oxoglutarate + CO2 + NADPH + H+
Ds-isocitrate + NADP+
2-oxoglutarate + CO2 + NADPH
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isocitrate + APADP+
2-oxoglutarate + CO2 + APADPH
isocitrate + NAD+
2-oxoglutarate + CO2 + NADH + H+
isocitrate + NADP+
2-oxoglutarate + CO2 + NADPH + H+