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6.2.1.14: 6-carboxyhexanoate-CoA ligase

This is an abbreviated version!
For detailed information about 6-carboxyhexanoate-CoA ligase, go to the full flat file.

Word Map on EC 6.2.1.14

Reaction

ATP
+
6-Carboxyhexanoate
+
CoA
=
AMP
+
diphosphate
+
6-carboxyhexanoyl-CoA

Synonyms

6-Carboxyhexanoate-CoA synthetase, 6-Carboxyhexanoyl-CoA synthetase, AaBioW, BaBioW, BioW, Pimeloyl-CoA synthase, Pimeloyl-CoA synthetase, Pimelyl-CoA synthetase, Synthetase, pimelyl coenzyme A

ECTree

     6 Ligases
         6.2 Forming carbon-sulfur bonds
             6.2.1 Acid-thiol ligases
                6.2.1.14 6-carboxyhexanoate-CoA ligase

Engineering

Engineering on EC 6.2.1.14 - 6-carboxyhexanoate-CoA ligase

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PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
H16A
site-directed mutagenesis, the mutant variant displays only a modest 20% loss in activity relative to the wild-type, reflecting the importance of these other interacting residues in stabilizing CoA binding
R159A
site-directed mutagenesis, the activity to hydrolyze adenylates of noncognate substrates is abolished in the mutant. The R159A variant can no longer proofread, but the enzyme still retains ligase activity and can catalyze the formation of pimeloyl-CoA, the mutant demonstrates a notable reduction in turnover, which is in line with the function of the residue in forming the exterior wall of the pimelate-binding cavity
R201A
site-directed mutagenesis, the mutation has little effect on product formation
R215A
site-directed mutagenesis, the mutant demonstrates a substantial reduction in product formation
S182A
site-directed mutagenesis, the mutant demonstrates a substantial reduction in product formation
Y187A
site-directed mutagenesis, the mutant demonstrates a notable reduction in turnover, which is in line with the function of the residue in forming the exterior wall of the pimelate-binding cavity
Y199A
site-directed mutagenesis, the mutation has little effect on product formation
R213A
site-directed mutagenesis, almost inactive mutant
R227E
site-directed mutagenesis, the mutant shows a turnover with the natural substrate pimelic acid that is reduced by around 25fold to about 4% activity remaining compared to the wild-type
R227K
site-directed mutagenesis, the mutant shows a turnover with the natural substrate pimelic acid that is reduced by around 25fold to about 4% activity remaining compared to the wild-type
Y199F
site-directed mutagenesis, the mutant retains 55% activity compared to wild-type, the Y199F mutant is inactive with heptanoic acid and octanoic acid, the Y199F mutant displayed a twofold greater activity with pimelic acid but no improvement with azelaic acid compared to wild-type
Y211F
R213A
-
site-directed mutagenesis, almost inactive mutant
-
Y199F
-
site-directed mutagenesis, the mutant retains 55% activity compared to wild-type, the Y199F mutant is inactive with heptanoic acid and octanoic acid, the Y199F mutant displayed a twofold greater activity with pimelic acid but no improvement with azelaic acid compared to wild-type
-
Y211F
additional information