4.1.1.8: oxalyl-CoA decarboxylase

This is an abbreviated version!
For detailed information about oxalyl-CoA decarboxylase, go to the full flat file.

Word Map on EC 4.1.1.8

Reaction

oxalyl-CoA
=
formyl-CoA
+
CO2

Synonyms

ODC, Oxalyl coenzyme A decarboxylase, Decarboxylase, oxalyl coenzyme A, OXC, oxalyl-coenzyme A decarboxylase, oxalyl CoA decarboxylase, yfdU

ECTree

     4 Lyases
         4.1 Carbon-carbon lyases
             4.1.1 Carboxy-lyases
                4.1.1.8 oxalyl-CoA decarboxylase

Reference

Reference on EC 4.1.1.8 - oxalyl-CoA decarboxylase

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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Quale, J.R.
Oxalyl-CoA Decarboxylase
Methods Enzymol.
13
369-372
1969
Cucurbita pepo, Cupriavidus oxalaticus, Pseudomonas sp., Triticum aestivum, Vicia faba
-
Manually annotated by BRENDA team
Quale, J.R.
Carbon assimilation of Pseudomomnas oxalaticus (OX 1)
Biochem. J.
89
492-503
1963
Pseudomonas sp., Cupriavidus oxalaticus
Manually annotated by BRENDA team
Baetz, A.L.; Allison, M.J.
Purification and characterization of oxalyl-coenzyme A decarboxylase from Oxalobacter formigenes
J. Bacteriol.
171
2605-2608
1989
Oxalobacter formigenes
Manually annotated by BRENDA team
Lung, H.Y.; Cornelius, J.G.; Peck, A.B.
Cloning and expression of the Oxalyl-CoA decarboxylase gene from the bacterium, Oxalobacter formigenes: Prospects for gene therapy to control Ca-Oxalate kidney stone formation
Am. J. Kidney Dis.
17
381-385
1991
Oxalobacter formigenes
Manually annotated by BRENDA team
Lung, H.Y.; Baetz, A.L.; Peck, A.B.
Molecular cloning, DNA sequence, and gene expression of the oxalyl-coenzyme A decarboxylase gene, oxc, from the bacterium Oxalobacter formigenes
J. Bacteriol.
176
2468-2472
1994
Oxalobacter formigenes
Manually annotated by BRENDA team
Hokohama, S.; Honma, Y.; Toma, C.; Ogawa, Y.
Oxalate-degrading Enterococcus faecalis
Microbiol. Immunol.
44
235-240
2000
Enterococcus faecalis
Manually annotated by BRENDA team
Federici, F.; Vitali, B.; Gotti, R.; Pasca, M.R.; Gobbi, S.; Peck, A.B.; Brigidi, P.
Characterization and heterologous expression of the oxalyl coenzyme A decarboxylase gene from Bifidobacterium lactis
Appl. Environ. Microbiol.
70
5066-5073
2004
Bifidobacterium animalis subsp. lactis (Q75PZ0), Bifidobacterium animalis subsp. lactis
Manually annotated by BRENDA team
Berthold, C.L.; Sidhu, H.; Ricagno, S.; Richards, N.G.; Lindqvist, Y.
Detection and characterization of merohedral twinning in crystals of oxalyl-coenzyme A decarboxylase from Oxalobacter formigenes
Biochim. Biophys. Acta
1764
122-128
2006
Oxalobacter formigenes
Manually annotated by BRENDA team
Berthold, C.L.; Moussatche, P.; Richards, N.G.; Lindqvist, Y.
Structural basis for activation of the thiamin diphosphate-dependent enzyme oxalyl-CoA decarboxylase by adenosine diphosphate
J. Biol. Chem.
280
41645-41654
2005
Oxalobacter formigenes
Manually annotated by BRENDA team
Azcarate-Peril, M.A.; Bruno-Barcena, J.M.; Hassan, H.M.; Klaenhammer, T.R.
Transcriptional and functional analysis of oxalyl-coenzyme A (CoA) decarboxylase and formyl-CoA transferase genes from Lactobacillus acidophilus
Appl. Environ. Microbiol.
72
1891-1899
2006
Lactobacillus acidophilus
Manually annotated by BRENDA team
Turroni, S.; Vitali, B.; Bendazzoli, C.; Candela, M.; Gotti, R.; Federici, F.; Pirovano, F.; Brigidi, P.
Oxalate consumption by lactobacilli: evaluation of oxalyl-CoA decarboxylase and formyl-CoA transferase activity in Lactobacillus acidophilus
J. Appl. Microbiol.
103
1600-1609
2007
Lactobacillus acidophilus (A4PE17), Lactobacillus acidophilus, Lactobacillus acidophilus LA14 (A4PE17)
Manually annotated by BRENDA team
Bendazzoli, C.; Turroni, S.; Gotti, R.; Olmo, S.; Brigidi, P.; Cavrini, V.
Determination of oxalyl-coenzyme A decarboxylase activity in Oxalobacter formigenes and Lactobacillus acidophilus by capillary electrophoresis
J. Chromatogr. B
854
350-356
2007
Lactobacillus acidophilus, Oxalobacter formigenes, Lactobacillus acidophilus LA 14
Manually annotated by BRENDA team
Berthold, C.L.; Toyota, C.G.; Moussatche, P.; Wood, M.D.; Leeper, F.; Richards, N.G.; Lindqvist, Y.
Crystallographic snapshots of oxalyl-CoA decarboxylase give insights into catalysis by nonoxidative ThDP-dependent decarboxylases
Structure
15
853-861
2007
Oxalobacter formigenes (P40149)
Manually annotated by BRENDA team
Mitsuma, T.; Odajima, H.; Momiyama, Z.; Watanabe, K.; Masuguchi, M.; Sekine, T.; Shidara, S.; Hirano, S.
Enhancement of gene expression by a peptide p(CHWPR) produced by Bifidobacterium lactis BB-12
Microbiol. Immunol.
52
144-155
2008
Bifidobacterium animalis subsp. lactis, Bifidobacterium animalis subsp. lactis BB-12
Manually annotated by BRENDA team
Abratt, V.R.; Reid, S.J.
Oxalate-degrading bacteria of the human gut as probiotics in the management of kidney stone disease
Adv. Appl. Microbiol.
72
63-87
2010
Bifidobacterium dentium, Escherichia coli, Enterococcus faecalis, Eggerthella lenta, Lactobacillus gasseri, Limosilactobacillus reuteri, Bifidobacterium animalis subsp. lactis, Lactobacillus acidophilus (A4PE17), Bradyrhizobium sp. (A4YXN1), Paraburkholderia phytofirmans (B2T9D2), Lactobacillus johnsonii (C2E3B5), Oxalobacter formigenes (C3XBB9), Oxalobacter formigenes, Bifidobacterium gallicum (D1NS77), Providencia rettgeri (D4C4C5), Shigella boydii (Q31Y98), Paraburkholderia phytofirmans PsJN (B2T9D2), Escherichia coli ATCC 8739, Lactobacillus acidophilus ATCC 4796 (A4PE17), Bradyrhizobium japonicum ORS278 (A4YXN1), Bifidobacterium gallicum DSM 20093 (D1NS77), Limosilactobacillus reuteri 100-23, Providencia rettgeri DSM 1131 (D4C4C5), Oxalobacter formigenes OXCC13 (C3XBB9), Lactobacillus gasseri Gasser AM63, Lactobacillus johnsonii ATCC 33200 (C2E3B5), Bifidobacterium dentium ATCC 27678, Shigella boydii Sb 227 (Q31Y98)
Manually annotated by BRENDA team
Turroni, S.; Bendazzoli, C.; Dipalo, S.C.; Candela, M.; Vitali, B.; Gotti, R.; Brigidi, P.
Oxalate-degrading activity in Bifidobacterium animalis subsp. lactis: impact of acidic conditions on the transcriptional levels of the oxalyl coenzyme A (CoA) decarboxylase and formyl-CoA transferase genes
Appl. Environ. Microbiol.
76
5609-5620
2010
no activity in Bifidobacterium adolescentis, Bifidobacterium animalis subsp. lactis (B9X297), Bifidobacterium animalis subsp. lactis BI07 (B9X297), no activity in Bifidobacterium adolescentis ATCC 15703
Manually annotated by BRENDA team
Werther, T.; Zimmer, A.; Wille, G.; Golbik, R.; Weiss, M.S.; Koenig, S.
New insights into structure-function relationships of oxalyl CoA decarboxylase from Escherichia coli
FEBS J.
277
2628-2640
2010
Escherichia coli (P0AFI0), Escherichia coli
Manually annotated by BRENDA team
Mullins, E.A.; Sullivan, K.L.; Kappock, T.J.
Function and X-ray crystal structure of Escherichia coli YfdE
PLoS ONE
8
e67901
2013
Escherichia coli, Oxalobacter formigenes
Manually annotated by BRENDA team
Mullins, E.A.; Starks, C.M.; Francois, J.A.; Sael, L.; Kihara, D.; Kappock, T.J.
Formyl-coenzyme A (CoA):oxalate CoA-transferase from the acidophile Acetobacter aceti has a distinctive electrostatic surface and inherent acid stability
Protein Sci.
21
686-696
2012
Acetobacter aceti
Manually annotated by BRENDA team
Fontenot, E.M.; Ezelle, K.E.; Gabreski, L.N.; Giglio, E.R.; McAfee, J.M.; Mills, A.C.; Qureshi, M.N.; Salmon, K.M.; Toyota, C.G.
YfdW and YfdU are required for oxalate-induced acid tolerance in Escherichia coli K-12
J. Bacteriol.
195
1446-1455
2013
Escherichia coli
Manually annotated by BRENDA team