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3.5.1.11: penicillin amidase

This is an abbreviated version!
For detailed information about penicillin amidase, go to the full flat file.

Word Map on EC 3.5.1.11

Reaction

penicillin
+
H2O
=
a carboxylate
+
6-aminopenicillanate

Synonyms

ACPGA001 PGA, AfPGA, alpha-acylamino-beta-lactam acylhydrolase, amidase, amidohydrolase, ampicillin acylase, AuAAC, benzylpenicillin acylase, BmPGA, Eca3205, KcPGA, maPGA, More, novozym 217, PA, PAC, penicillin acylase, penicillin amidase, Penicillin amidohydrolase, penicillin G acylase, Penicillin G amidase, Penicillin G amidohydrolase, penicillin V acylase, Penicillin V amidase, penicillin-G acylase, PGA, PGA650, PVA, semacylase, Sm-PVA, YxeI

ECTree

     3 Hydrolases
         3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
             3.5.1 In linear amides
                3.5.1.11 penicillin amidase

Engineering

Engineering on EC 3.5.1.11 - penicillin amidase

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PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Q3C/P751C
-
temperature optimum is three degrees higher than for wild-type. Half-life of mutant at 55°C is increased by 50%
T206G
-
specific activity of the mutant enzyme is 60% higher compared to the wild-type enzyme, pI is 5.5
T206G/G213G
-
mutant enzyme with 1.9fold increased specific activity compared to completely processed wild-type enzyme, mutation stabilizes the precursor form, pI value is 5.6
T206G/S213G
-
construction of a mutant with extended C-terminus of the A-chain comprising parts of the connecting linker peptide showing almost 2fold increased activity and 3fold higher specificity compared to the wild-type enzyme, overview
T206G/S213G/T219G
-
mutant enzyme with 2.3fold increased specific activity compared to completely processed wild-type enzyme
T206P
-
mutant undergoes normal proteolytic processing leading to a completely processed enzyme with pI 5.3
C1A
no activity, catalytic residue
C1S
no activity, catalytic residue
A149Q
activity is too low to measure thermal stability
A305D
mutation in beta-subunit. Half-life at 50°C is 1.6fold higher than wild-type value. Activity is about 60% of wild-type value
A545K
mutation in beta-subunit. Half-life at 50°C is about 80% of wild-type value. Activity is about 80% of wild-type value
A80R
mutation in alpha-subunit. Half-life at 50°C is 2.6fold higher than wild-type value. Activity is 1.6fold higher than wild-type value
A84P
mutation in beta-subunit. Half-life at 50°C is 1.3fold higher than wild-type value. Activity is identical to wild-type value
alphaF146A
mutant selective for (S)-ampicillin synthesis
alphaF146Q
mutant selective for (S)-ampicillin synthesis
alphaF146R
mutant selective for (S)-ampicillin synthesis
alphaF146Y
betaF24A
betaF24A/alphaF146Y
very low amidase activity
betaF24C
mutant selective for (R)-ampicillin synthesis
betaF24P
mutant selective for (R)-ampicillin synthesis
betaF24S
mutant selective for (R)-ampicillin synthesis
betaF24T
used as negative control because of the negative effect on synthetic and hydrolytic activities
betaF24T/alphaF146Y
used as negative control because of the negative effect on synthetic and hydrolytic activities
C290C
-
20% decrease in production of penicillin G acylase activity
D13K
-
mutation in beta-subunit, no change in enzyme stability or kinetic properties, but improved stability after immobilization on glyoxyl-agarose
E130T
mutation in alpha-subunit. Half-life at 50°C is about 60% of wild-type value. Activity is about 1.2fold higher than wild-type value
E272K
-
mutation in beta-subunit, no change in enzyme stability or kinetic properties, but improved stability after immobilization on glyoxyl-agarose
F146A
-
mutation in alpha-subunit. 99% of ampicillin synthesis activity compared to wild-type
F146C
-
mutation in alpha-subunit. 241% of ampicillin synthesis activity compared to wild-type
F146D
-
mutation in alpha-subunit. No ampicillin synthesis activity
F146E
-
mutation in alpha-subunit. 13% of ampicillin synthesis activity compared to wild-type
F146G
-
mutation in alpha-subunit. 61% of ampicillin synthesis activity compared to wild-type
F146H
-
mutation in alpha-subunit. 174% of ampicillin synthesis activity compared to wild-type
F146I
-
mutation in alpha-subunit. 135% of ampicillin synthesis activity compared to wild-type
F146K
-
mutation in alpha-subunit. 120% of ampicillin synthesis activity compared to wild-type
F146L
F146M
-
mutation in alpha-subunit. 85% of ampicillin synthesis activity compared to wild-type
F146N
-
mutation in alpha-subunit. 151% of ampicillin synthesis activity compared to wild-type
F146P
-
mutation in alpha-subunit. 112% of ampicillin synthesis activity compared to wild-type
F146Q
-
mutation in alpha-subunit. 114% of ampicillin synthesis activity compared to wild-type
F146R
-
mutation in alpha-subunit. 3% of ampicillin synthesis activity compared to wild-type
F146S
-
mutation in alpha-subunit. 238% of ampicillin synthesis activity compared to wild-type
F146T
-
mutation in alpha-subunit. 376% of ampicillin synthesis activity compared to wild-type
F146V
-
mutation in alpha-subunit. 153% of ampicillin synthesis activity compared to wild-type
F146W
F146Y
F146Y/F24A
-
mutation F24Y in beta-, F146Y in alpha-subunit, increased affinity for Calpha-substituted substrates
F71C
-
mutation in B-subunit shows a 100fold increase in kcat/Km towards glutaryl-L-leucine
F71L
-
mutation in B-subunit shows a 100fold increase in kcat/Km towards glutaryl-L-leucine
H26G
activity is too low to measure thermal stability
K299H
-
mutant shows very low processing and 90% loss of activity
K299Q
-
mutant enzyme shows no processing
K299S
-
mutant enzyme shows no processing
L100E
mutation in beta-subunit. Half-life at 50°C is 1.2fold higher than wild-type value. Activity is about 50% of wild-type value
M90R
mutation in alpha-subunit. Half-life at 50°C is nearly identical to wild-type value. Activity is about 70% of wild-type value
N241G
-
site-directed mutagensis of subunit B residue, leads to reduced activity compared to the wild-type enzyme
N241S
-
site-directed mutagensis of subunit B residue, leads to reduced activity compared to the wild-type enzyme
N348D
mutation in beta-subunit. Half-life at 50°C is 1.5fold higher than wild-type value. Activity is nearly identical to wild-type value
Q118E
activity is too low to measure thermal stability
R145A
-
mutation in alpha-subunit. 154% of ampicillin synthesis activity compared to wild-type
R145C
-
mutation in alpha-subunit. 169% of ampicillin synthesis activity compared to wild-type
R145D
-
mutation in alpha-subunit. 15% of ampicillin synthesis activity compared to wild-type
R145E
-
mutation in alpha-subunit. 6% of ampicillin synthesis activity compared to wild-type
R145F
-
mutation in alpha-subunit. 131% of ampicillin synthesis activity compared to wild-type
R145G
-
mutation in alpha-subunit. 256% of ampicillin synthesis activity compared to wild-type. Due to increased tendency of the acyl-enzyme intermediate to react with beta-lactam nucleophile instead of water, the mutant demonstrates an enhanced synthetic yield over wild-type penicillin acylase at high substrate concentrations. This is accompanied by an increased conversion of 6-aminopenicillanic acid to ampicillin as well as a decreased undesirable hydrolysis of the acyl donor
R145H
-
mutation in alpha-subunit. 78% of ampicillin synthesis activity compared to wild-type
R145I
-
mutation in alpha-subunit. 120% of ampicillin synthesis activity compared to wild-type
R145K
-
mutation in alpha-subunit. 145% of ampicillin synthesis activity compared to wild-type
R145L
-
mutation in alpha-subunit. 237% of ampicillin synthesis activity compared to wild-type. Due to increased tendency of the acyl-enzyme intermediate to react with beta-lactam nucleophile instead of water, the mutant demonstrates an enhanced synthetic yield over wild-type penicillin acylase at high substrate concentrations. This is accompanied by an increased conversion of 6-aminopenicillanic acid to ampicillin as well as a decreased undesirable hydrolysis of the acyl donor
R145M
-
mutation in alpha-subunit. 129% of ampicillin synthesis activity compared to wild-type
R145N
-
mutation in alpha-subunit. 173% of ampicillin synthesis activity compared to wild-type
R145P
-
mutation in alpha-subunit. 137% of ampicillin synthesis activity compared to wild-type
R145Q
-
mutation in alpha-subunit. 158% of ampicillin synthesis activity compared to wild-type
R145S
-
mutation in alpha-subunit. 192% of ampicillin synthesis activity compared to wild-type. Due to increased tendency of the acyl-enzyme intermediate to react with beta-lactam nucleophile instead of water, the mutant demonstrates an enhanced synthetic yield over wild-type penicillin acylase at high substrate concentrations. This is accompanied by an increased conversion of 6-aminopenicillanic acid to ampicillin as well as a decreased undesirable hydrolysis of the acyl donor
R145T
-
mutation in alpha-subunit. 127% of ampicillin synthesis activity compared to wild-type
R145V
-
mutation in alpha-subunit. 127% of ampicillin synthesis activity compared to wild-type
R145W
-
mutation in alpha-subunit. 103% of ampicillin synthesis activity compared to wild-type
R145Y
-
mutation in alpha-subunit. 37% of ampicillin synthesis activity compared to wild-type
R276K
-
mutation in beta-subunit, no change in enzyme stability or kinetic properties, but improved stability after immobilization on glyoxyl-agarose
S374T
mutation in beta-subunit. Half-life at 50°C is about 90% of wild.type value. Activity about 50% of wild-type value
S9E
activity is too low to measure thermal stability
T121D
mutation in alpha-subunit. Half-life at 50°C is about 70% of wild-type value. Activity is about 40% of wild-type value
T150N
mutation in alpha-subunit. Half-life at 50°C is 1.5fold higher than wild-type value. Activity is about 50% of wild-type value
T263G
-
slowly processing mutant enzyme
T289C
-
production of penicillin G acylase activity is 92% improved
T289G
-
production of penicillin G acylase activity is 20% improved
T289S
-
production of penicillin G acylase activity is 85% improved
T311P/Q312A
mutation in beta-subunit. Half-life at 50°C is 2fold higher than wild-type value. Activity is about 90% of wild-type value
V184K
mutation in beta-subunit. Half-life at 50°C is about 60% of wild-type value. Activity is about 60% of wild-type value
V359L
mutation in beta-subunit. Half-life at 50°C is 1.4fold higher than wild-type value. Activity is about 60% of wild-type value
V400L
mutation in beta-subunit. Half-life at 50°C is 1.8fold higher than wild-type value. Activity is about 75% of wild-type value
V56R/T32Y
-
mutation of beta-subunit, plus F146Y in alpha-subunit, 2.3% of wild-type activity with substrate penicillin G, 460% of wild-type activity with cephalosporin acylase substrate glutaryl-7-aminocephalosporanic acid
V56R/T32Y/I177Y
-
mutation of beta-subunit, plus F146Y in alpha-subunit, 1.8% of wild-type activity with substrate penicillin G, 490% of wild-type activity with cephalosporin acylase substrate glutaryl-7-aminocephalosporanic acid
V56R/T32Y/I177Y/P49Q
-
mutation of beta-subunit, plus F146Y in alpha-subunit, 1.3% of wild-type activity with substrate penicillin G, 510% of wild-type activity with cephalosporin acylase substrate glutaryl-7-aminocephalosporanic acid
V56R/T32Y/I177Y/P49Q/W154Y
-
mutation of beta-subunit, plus F146Y in alpha-subunit, 1.2% of wild-type activity with substrate penicillin G, 600% of wild-type activity with cephalosporin acylase substrate glutaryl-7-aminocephalosporanic acid
V56R/T32Y/I177Y/P49Q/W154Y/F24L
-
mutation of beta-subunit, plus F146Y in alpha-subunit, 0.3% of wild-type activity with substrate penicillin G, 760% of wild-type activity with cephalosporin acylase substrate glutaryl-7-aminocephalosporanic acid
V97K
activity is too low to measure thermal stability
W25Y
mutation in alpha-subunit. Half-life at 50°C is 2.7fold higher than wild-type value. Activity is 1.4fold higher than wild-type value
H481Y
-
changes in Km
K375N
-
destabilisation of transition state
M168V
-
highly decreased specificity constants
S1C
replacement of serine of the beta-subunit with cysteine results in a fully processed but inactive enzyme
S1G
the second mutant in which the N-terminal serine is replaced by glycine remains in the unprocessed and inactive form
S290G
C1A
-
no catalytic activity, precursor form pre-C1S is not processed
C1S
-
no catalytic activity, precursor form pre-C1S is not processed
N175A
-
no catalytic activity, about 50% of precursor form pre-N175A is processed
N198Y
the mutant enzyme shows 1.36fold higher specific activity compared to wild-type enzyme
N198Y/S110C
the mutant enzyme shows 2.26fold higher specific activity compared to wild-type enzyme
T63S
the mutant enzyme shows 11.14fold higher specific activity compared to wild-type enzyme
T63S/N198Y
the mutant enzyme shows 4.6fold higher specific activity compared to wild-type enzyme
T63S/S110C
the mutant enzyme shows 3.97fold higher specific activity compared to wild-type enzyme
T63S/S110C/N198Y
the mutant enzyme shows 12.4fold higher specific activity and 11.3fold higher catalytic efficiency compared to wild-type enzyme. The mutant enzyme has a potential for large-scale industrial application for 6-aminopenicillanic acid production
D22E
the specific activity is 10.9% compared to wild-type enzyme. Protein expression yields is 34 mg/ml compared to 262 mg/ml for the native enzyme
D22N
the specific activity is 5.1% compared to wild-type enzyme. Protein expression yields is 2.5 mg/ml compared to 262 mg/ml for the native enzyme
R19H
the specific activity is 6% compared to wild-type enzyme. Protein expression yields is 121 mg/ml compared to 262 mg/ml for the native enzyme
R215L
the specific activity is 7.4% compared to wild-type enzyme. Protein expression yields is 5.6 mg/ml compared to 262 mg/ml for the native enzyme
W23F
the specific activity is 4% compared to wild-type enzyme. Protein expression yields is 6.9 mg/ml compared to 262 mg/ml for the native enzyme
W23F/W87Y
the specific activity is 0.13% compared to wild-type enzyme. Protein expression yields is 3.3 mg/ml compared to 262 mg/ml for the native enzyme
W23I
the specific activity is 0.9% compared to wild-type enzyme. Protein expression yields is 7.1 mg/ml compared to 262 mg/ml for the native enzyme
W23I/W87N
the specific activity is 0.02% compared to wild-type enzyme. Protein expression yields is 3.6 mg/ml compared to 262 mg/ml for the native enzyme
W87N
the specific activity is 81.2% compared to wild-type enzyme. Protein expression yields is 196.8 mg/ml compared to 262 mg/ml for the native enzyme
W87Y
the specific activity is 1.5% compared to wild-type enzyme. Protein expression yields is 6.7 mg/ml compared to 262 mg/ml for the native enzyme
R19H
-
the specific activity is 6% compared to wild-type enzyme. Protein expression yields is 121 mg/ml compared to 262 mg/ml for the native enzyme
-
R215L
-
the specific activity is 7.4% compared to wild-type enzyme. Protein expression yields is 5.6 mg/ml compared to 262 mg/ml for the native enzyme
-
W23F
-
the specific activity is 4% compared to wild-type enzyme. Protein expression yields is 6.9 mg/ml compared to 262 mg/ml for the native enzyme
-
W87Y
-
the specific activity is 1.5% compared to wild-type enzyme. Protein expression yields is 6.7 mg/ml compared to 262 mg/ml for the native enzyme
-
F145A
-
alpha chain, no formation of cephalexin, no activity with nitrophenylacetylaminobenzoic acid
F145L
-
alpha chain, no formation of cephalexin, no activity with nitrophenylacetylaminobenzoic acid
F145Y
-
alpha chain, slightly increased formation of cephalexin, 32% of nitrophenylacetylaminobenzoic acid hydrolyzing activity
K427A
K430A
K430A/K427A
-
mutation in beta-chain. Mutant shows a good stability to solvent and thermostability
V24F
-
beta chain, no effect on the formation of cephalexin, 11% of nitrophenylacetylaminobenzoic acid hydrolyzing activity
Y144R
-
alpha chain, reduced formation of cephalexin, 72% of nitrophenylacetylaminobenzoic acid hydrolyzing activity
Y144R/V24F
-
Y144R on alpha chain, V24F on beta chain, reduced formation of cephalexin, 4% of nitrophenylacetylaminobenzoic acid hydrolyzing activity
N272D
mutation at beta-subunit results in a drastic decrease of activity
N272V
mutation at beta-subunit results in a drastic decrease of activity
S1A
mutation at beta-subunit results in an inactive enzyme
S1C
mutation at beta-subunit results in an inactive enzyme
S1D
mutation at beta-subunit results in an inactive enzyme
S1H
mutation at beta-subunit results in an inactive enzyme
S1K
mutation at beta-subunit results in an inactive enzyme
V70A
mutation at beta-subunit results in a drastic decrease of activity
V70D
mutation at beta-subunit results in a drastic decrease of activity
N272D
-
mutation at beta-subunit results in a drastic decrease of activity
-
S1A
-
mutation at beta-subunit results in an inactive enzyme
-
S1C
-
mutation at beta-subunit results in an inactive enzyme
-
V70A
-
mutation at beta-subunit results in a drastic decrease of activity
-
V70D
-
mutation at beta-subunit results in a drastic decrease of activity
-
I57F
site-directed mutagenesis, the substrate specificity of the mutant shifts from penicillin K to penicillin G, Km for penicillin G is 4.5fold, while the catalytic efficiency remains at wild-type value
L188F
site-directed mutagenesis, the substrate specificity of the mutant shifts from penicillin K to penicillin G, penicillin G binding is 10fold improved compared to the wild-type enzyme
L188R
site-directed mutagenesis, the substrate specificity of the mutant shifts from penicillin K to penicillin G
L188R/S189F
site-directed mutagenesis, the substrate specificity of the mutant shifts from penicillin K to penicillin G
L24F
site-directed mutagenesis, the substrate specificity of the mutant shifts from penicillin K to penicillin G, penicillin G binding is 12fold improved compared to the wild-type enzyme
L24F/I57F
site-directed mutagenesis, the substrate specificity of the mutant shifts from penicillin K to penicillin G
L24F/I57F/L188F
site-directed mutagenesis, the substrate specificity of the mutant shifts from penicillin K to penicillin G
L24F/I57F/L188R/S189F
site-directed mutagenesis, inactive mutant
S189F
site-directed mutagenesis, the substrate specificity of the mutant shifts from penicillin K to penicillin G, penicillin G binding is 9fold improved compared to the wild-type enzyme
additional information