3.1.21.6: CC-preferring endodeoxyribonuclease

This is an abbreviated version!
For detailed information about CC-preferring endodeoxyribonuclease, go to the full flat file.

Word Map on EC 3.1.21.6

Reaction

Endonucleolytic cleavage to give 5'-phosphooligonucleotide end-products, with a preference for cleavage within the sequence CC =

Synonyms

Streptomyces glaucescens exocytoplasmic dodeoxyribonuclease, Nuclease, endodeoxyribo-, Deoxyriboendonuclease, DNA-adenine-transferase, endodeoxyribonuclease, endonuclease II, endonuclease NX, endonuclease T, Escherichia coli endonuclease II, Redoxyendonuclease, VirD1/D2 endonuclease, EC 3.1.4.30, R1Bm EN, R1Bm endonuclease

ECTree

     3 Hydrolases
         3.1 Acting on ester bonds
             3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
                3.1.21.6 CC-preferring endodeoxyribonuclease

Substrates Products

Substrates Products on EC 3.1.21.6 - CC-preferring endodeoxyribonuclease

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SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
28S rDNA + H2O
?
show the reaction diagram
-
R1Bm EN cleaves both strands of the 28S rDNA sequence at the target site, 5'-A(G/C)(A/T)!(A/G)T-3' is the consensus sequence, thus cleavage site
-
-
?
covalently closed circular DNA pUC18 + H2O
?
show the reaction diagram
-
-
-
-
?
double-stranded DNA
?
show the reaction diagram
Lambda DNA
Double-stranded fragments between 7 and 24 bases with 5' and/or 3'-protruding single-stranded tails
show the reaction diagram
-
-
-
?
lambda DNA + H2O
?
show the reaction diagram
-
-
-
-
?
pBR322 DNA + H2O
DNA fragments carrying phosphate groups at 5' ends and hydroxyl group at the 3' ends, respectively
show the reaction diagram
-
-
-
-
?
additional information
?
-