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1.12.2.1: cytochrome-c3 hydrogenase

This is an abbreviated version!
For detailed information about cytochrome-c3 hydrogenase, go to the full flat file.

Word Map on EC 1.12.2.1

Reaction

H2
+ 2 ferricytochrome c3 = 2 H+ + 2 ferrocytochrome c3

Synonyms

cytochrome c3 hydrogenase, cytochrome c3 reductase, cytochrome hydrogenase, cytochrome-c3 hydrogenase, Fe-only hydrogenase, H2:ferricytochrome c3 oxidoreductase, H2ase, hyd B, HydAB, hydrogenase, hydrogenase, cytochrome, Hyn-1B, Hyn1 hydrogenase, HynAB-1, HysAB, [FeFe] hydrogenase, [Fe] hydrogenase, [Fe]-hydrogenase, [NiFeSe] Hase, [NiFeSe] hydrogenase, [NiFe] Hase, [NiFe] hydrogenase, [NiFe] hydrogenase 1, [NiFe]-hydrogenase

ECTree

     1 Oxidoreductases
         1.12 Acting on hydrogen as donor
             1.12.2 With a cytochrome as acceptor
                1.12.2.1 cytochrome-c3 hydrogenase

Reference

Reference on EC 1.12.2.1 - cytochrome-c3 hydrogenase

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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Odom, J.M.; Peck, H.D.
Hydrogenase, electron-transfer proteins, and energy coupling in the sulfate-reducing bacteria Desulfovibrio
Annu. Rev. Microbiol.
38
551-592
1984
Desulfovibrio desulfuricans, Megalodesulfovibrio gigas, Desulfovibrio vulgaris, Desulfovibrio desulfuricans Norway 4, Desulfovibrio vulgaris Hildenborough
Manually annotated by BRENDA team
Lalla-Maharajh, W.V.; Hall, D.O.; Cammack, R.; Rao, K.K.
Purification and properties of the membrane-bound by hydrogenase from Desulfovibrio desulfuricans
Biochem. J.
209
445-454
1983
Desulfovibrio desulfuricans, Desulfovibrio desulfuricans Norway
Manually annotated by BRENDA team
Yagi, T.; Honya, M.; Tamiya, N.
Purification and properties of hydrogenases of different origins
Biochim. Biophys. Acta
153
699-705
1968
Desulfovibrio desulfuricans
Manually annotated by BRENDA team
Yagi, T.; Kimura, K.; Daidoji, H.; Sakai, F.; Tamura, S.; Inokuchi, H.
Properties of purified hydrogenase from the particulate fraction of Desulfovibrio vulgaris, Miyazaki
J. Biochem.
79
661-671
1976
Desulfovibrio vulgaris, Desulfovibrio vulgaris Miyazaki
Manually annotated by BRENDA team
Grande, H.J.; van Berkel-Arts, A.; Bregh, J.; van Dijk, K.; Veeger, C.
Kinetic properties of hydrogenase isolated from Desulfovibrio vulgaris (Hildenborough)
Eur. J. Biochem.
131
81-88
1983
Desulfovibrio vulgaris
Manually annotated by BRENDA team
Castro, M.J.M.; Cabral, J.M.S.
Kinetic studies of hydrogenase in AOT reversed micelles
Enzyme Microb. Technol.
11
6-11
1989
Megalodesulfovibrio gigas
-
Manually annotated by BRENDA team
Castro, M.J.M.; Cabral, J.M.S.
Stability of hydrogenase in AOT reversed micelles
Enzyme Microb. Technol.
11
668-672
1989
Megalodesulfovibrio gigas
-
Manually annotated by BRENDA team
Higuchi, Y.; Yasuoka, N.; Kakudo, M.; Katsube, Y.; Yagi, T.; Inokuchi, H.
Single crystals of hydrogenase from Desulfovibrio vulgaris Miyazaki F
J. Biol. Chem.
262
2823-2825
1987
Desulfovibrio vulgaris
Manually annotated by BRENDA team
Rieder, R.; Cammack, R.; Hall, D.O.
Purification and properties of the soluble hydrogenase from Desulfovibrio desulfuricans (strain Norway 4)
Eur. J. Biochem.
145
637-643
1984
Desulfovibrio desulfuricans, Desulfovibrio desulfuricans Norway 4
Manually annotated by BRENDA team
Fritz, G.; Griesshaber, D.; Seth, O.; Kroneck, P.M.
Nonaheme cytochrome c, a new physiological electron acceptor for [Ni,Fe] hydrogenase in the sulfate-reducing bacterium Desulfovibrio desulfuricans Essex: primary sequence, molecular parameters, and redox properties
Biochemistry
40
1317-1324
2001
Desulfovibrio desulfuricans, Desulfovibrio desulfuricans Essex
Manually annotated by BRENDA team
Gogotov, I.N.
Hydrogenase of purple bacteria: properties and regulation of synthesis
Arch. Microbiol.
140
86-90
1984
Thiocapsa roseopersicina, Thiocapsa roseopersicina Bbs
-
Manually annotated by BRENDA team
Adams, M.W.W.; Hall, D.O.
Solubilization and partial purification of the membrane-bound hydrogenase of Escherichia coli
Biochem. Soc. Trans.
6
1339-1341
1978
Escherichia coli
Manually annotated by BRENDA team
Aubert, C.; Brugna, M.; Dolla, A.; Bruschi, M.; Giudici-Orticoni, M.T.
A sequential electron transfer from hydrogenases to cytochromes in sulfate-reducing bacteria
Biochim. Biophys. Acta
1476
85-92
2000
Desulfomicrobium norvegicum, Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
Manually annotated by BRENDA team
De Luca, G.; De Philip, P.; Dermoun, Z.; Rousset, M.; Vermegljo, A.
Reduction of technetium(VII) by Desulfovibrio fructosovorans is mediated by the nickel-iron hydrogenase
Appl. Environ. Microbiol.
67
4583-4587
2001
Solidesulfovibrio fructosivorans
Manually annotated by BRENDA team
Eng, L.H.; Lewin, M.B.M.; Neujahr, H.Y.
Kinetic properties of the periplasmic hydrogenase from Desulfovibrio desulfuricans NCIMB 8372 and use in photosensitized hydrogen-production
J. Chem. Technol. Biotechnol.
56
317-324
1993
Desulfovibrio desulfuricans
-
Manually annotated by BRENDA team
Higuchi, Y.; Yagi, T.
Liberation of hydrogen sulfide during the catalytic action of Desulfovibrio hydrogenase under the atmosphere of hydrogen
Biochem. Biophys. Res. Commun.
255
295-299
1999
Desulfovibrio vulgaris, Desulfovibrio vulgaris Miyazaki
Manually annotated by BRENDA team
Payne, R.B.; Gentry, D.M.; Rapp-Giles, B.J.; Casalot, L.; Wall, J.D.
Uranium reduction by Desulfovibrio desulfuricans strain G20 and a cytochrome c3 mutant
Appl. Environ. Microbiol.
68
3129-3132
2002
Desulfovibrio desulfuricans, Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
Manually annotated by BRENDA team
Guiral, M.; Leroy, G.; Bianco, P.; Gallice, P.; Guigliarelli, B.; Bruschi, M.; Nitschke, W.; Giudici-Orticoni, M.T.
Interaction and electron transfer between the high molecular weight cytochrome and cytochrome c3 from Desulfovibrio vulgaris Hildenborough: kinetic, microcalorimetric, EPR and electrochemical studies
Biochim. Biophys. Acta
1723
45-54
2005
Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
Manually annotated by BRENDA team
ElAntak, L.; Morelli, X.; Bornet, O.; Hatchikian, C.; Czjzek, M.; Dolla, A.; Guerlesquin, F.
The cytochrome c3-[Fe]-hydrogenase electron-transfer complex: structural model by NMR restrained docking
FEBS Lett.
548
1-4
2003
Desulfovibrio desulfuricans
Manually annotated by BRENDA team
Bento, I.; Matias, P.M.; Baptista, A.M.; da Costa, P.N.; van Dongen, W.M.; Saraiva, L.M.; Schneider, T.R.; Soares, C.M.; Carrondo, M.A.
Molecular basis for redox-Bohr and cooperative effects in cytochrome c3 from Desulfovibrio desulfuricans ATCC 27774: crystallographic and modeling studies of oxidized and reduced high-resolution structures at pH 7.6
Proteins
54
135-152
2004
Desulfovibrio desulfuricans
Manually annotated by BRENDA team
Pereira, P.M.; Teixeira, M.; Xavier, A.V.; Louro, R.O.; Pereira, I.A.
The Tmc complex from Desulfovibrio vulgaris hildenborough is involved in transmembrane electron transfer from periplasmic hydrogen oxidation
Biochemistry
45
10359-10367
2006
Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
Manually annotated by BRENDA team
Yahata, N.; Saitoh, T.; Takayama, Y.; Ozawa, K.; Ogata, H.; Higuchi, Y.; Akutsu, H.
Redox interaction of cytochrome c3 with [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F
Biochemistry
45
1653-1662
2006
Desulfovibrio vulgaris, Desulfovibrio vulgaris Miyazaki F
Manually annotated by BRENDA team
Vignais, P.M.
H/D exchange reactions and mechanistic aspects of the hydrogenases
Coord. Chem. Rev.
249
1677-1690
2005
Desulfovibrio vulgaris, Desulfovibrio vulgaris Miyazaki
-
Manually annotated by BRENDA team
Valente, F.M.; Oliveira, A.S.; Gnadt, N.; Pacheco, I.; Coelho, A.V.; Xavier, A.V.; Teixeira, M.; Soares, C.M.; Pereira, I.A.
Hydrogenases in Desulfovibrio vulgaris Hildenborough: structural and physiologic characterisation of the membrane-bound [NiFeSe] hydrogenase
J. Biol. Inorg. Chem.
10
667-682
2005
Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
Manually annotated by BRENDA team
Pieulle, L.; Morelli, X.; Gallice, P.; Lojou, E.; Barbier, P.; Czjzek, M.; Bianco, P.; Guerlesquin, F.; Hatchikian, E.C.
The type I/type II cytochrome c3 complex: an electron transfer link in the hydrogen-sulfate reduction pathway
J. Mol. Biol.
354
73-90
2005
Desulfocurvibacter africanus
Manually annotated by BRENDA team
Park, H.S.; Lin, S.; Voordouw, G.
Ferric iron reduction by Desulfovibrio vulgaris Hildenborough wild type and energy metabolism mutants
Antonie van Leeuwenhoek
93
79-85
2007
Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
Manually annotated by BRENDA team
Marshall, M.J.; Plymale, A.E.; Kennedy, D.W.; Shi, L.; Wang, Z.; Reed, S.B.; Dohnalkova, A.C.; Simonson, C.J.; Liu, C.; Saffarini, D.A.; Romine, M.F.; Zachara, J.M.; Beliaev, A.S.; Fredrickson, J.K.
Hydrogenase- and outer membrane c-type cytochrome-facilitated reduction of technetium(VII) by Shewanella oneidensis MR-1
Environ. Microbiol.
10
125-136
2008
Shewanella oneidensis, Shewanella oneidensis MR-1 / ATCC 700550
Manually annotated by BRENDA team
Valente, F.M.; Pereira, P.M.; Venceslau, S.S.; Regalla, M.; Coelho, A.V.; Pereira, I.A.
The [NiFeSe] hydrogenase from Desulfovibrio vulgaris Hildenborough is a bacterial lipoprotein lacking a typical lipoprotein signal peptide
FEBS Lett.
581
3341-3344
2007
Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
Manually annotated by BRENDA team
Iida, S.; Asakura, N.; Tabata, K.; Okura, I.; Kamachi, T.
Role of positive charge of lysine residue on cytochrome c3 for electrostatic interaction with hydrogenase
J. Porphyr. Phthalocyanines
11
66-73
2007
Desulfovibrio vulgaris
-
Manually annotated by BRENDA team
Teixeira, V.H.; Soares, C.M.; Baptista, A.M.
Proton pathways in a [NiFe]-hydrogenase: A theoretical study
Proteins
70
1010-1022
2008
Megalodesulfovibrio gigas
Manually annotated by BRENDA team
Maltempi de Souza, E.; de Oliveira Pedrosa, F.; Wassem, R.; Ford, C.M.; Yates, M.G.
Genes involved in Sec-independent membrane targeting of hydrogenase in Azotobacter chroococcum
Res. Microbiol.
158
272-278
2007
Azotobacter chroococcum, Azotobacter chroococcum MCD1
Manually annotated by BRENDA team
Rashamuse, K.; Mutambanengwe, C.; Whiteley, C.
Enzymatic recovery of platinum (IV) from industrial wastewater using a biosulphidogenic hydrogenase
Afr. J. Biotechnol.
7
1087-1095
2008
Bacteria
-
Manually annotated by BRENDA team
Caffrey, S.M.; Park, H.S.; Been, J.; Gordon, P.; Sensen, C.W.; Voordouw, G.
Gene expression by the sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough grown on an iron electrode under cathodic protection conditions
Appl. Environ. Microbiol.
74
2404-2413
2008
Desulfovibrio vulgaris str. Hildenborough (Q06173), Desulfovibrio vulgaris str. Hildenborough
Manually annotated by BRENDA team
Li, X.; Luo, Q.; Wofford, N.Q.; Keller, K.L.; McInerney, M.J.; Wall, J.D.; Krumholz, L.R.
A molybdopterin oxidoreductase is involved in H2 oxidation in Desulfovibrio desulfuricans G20
J. Bacteriol.
191
2675-2682
2009
Desulfovibrio desulfuricans, Desulfovibrio desulfuricans G20
Manually annotated by BRENDA team
Walker, C.B.; He, Z.; Yang, Z.K.; Ringbauer, J.A.; He, Q.; Zhou, J.; Voordouw, G.; Wall, J.D.; Arkin, A.P.; Hazen, T.C.; Stolyar, S.; Stahl, D.A.
The electron transfer system of syntrophically grown Desulfovibrio vulgaris
J. Bacteriol.
191
5793-5801
2009
Desulfovibrio vulgaris str. Hildenborough (Q06173)
Manually annotated by BRENDA team
Paixao, V.B.; Vis, H.; Turner, D.L.
Redox linked conformational changes in cytochrome c3 from Desulfovibrio desulfuricans ATCC 27774
Biochemistry
49
9620-9629
2010
Desulfovibrio desulfuricans
Manually annotated by BRENDA team
Quintas, P.O.; Oliveira, M.S.; Catarino, T.; Turner, D.L.
Electron transfer between multihaem cytochromes c3 from Desulfovibrio africanus
Biochim. Biophys. Acta
1827
502-506
2013
Desulfocurvibacter africanus
Manually annotated by BRENDA team
Ciaccafava, A.; Alberola, M.; Hameury, S.; Infossi, P.; Giudici-Orticoni, M.; Lojou, E.
Hydrogen bioelectrooxidation in ionic liquids: From cytochrome c 3 redox behavior to hydrogenase activity
Electrochim. Acta
56
3359-3368
2011
Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
-
Manually annotated by BRENDA team
Topin, J.; Rousset, M.; Antonczak, S.; Golebiowski, J.
Kinetics and thermodynamics of gas diffusion in a NiFe hydrogenase
Proteins
80
677-682
2012
Solidesulfovibrio fructosivorans (P18187)
Manually annotated by BRENDA team
Sugimoto, Y.; Kitazumi, Y.; Shirai, O.; Nishikawa, K.; Higuchi, Y.; Yamamoto, M.; Kano, K.
Electrostatic roles in electron transfer from [NiFe] hydrogenase to cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
Biochim. Biophys. Acta
1865
481-487
2017
Desulfovibrio vulgaris, Desulfovibrio vulgaris Miyazaki F
Manually annotated by BRENDA team
Yagi, T.; Ogo, S.; Higuchi, Y.
Catalytic cycle of cytochrome-c3 hydrogenase, a [NiFe]-enzyme, deduced from the structures of the enzyme and the enzyme mimic
Int. J. Hydrogen Energy
39
18543-18550
2014
Desulfovibrio vulgaris (P21853), Desulfovibrio vulgaris Miyazaki F (P21853)
-
Manually annotated by BRENDA team