Sequence Search
Examples:
Example
Search
sequences which contain "ikea"
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sequences which begin with "mia"
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sequences which end with "tkg"
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1. sequences which contain "tkr"
2. followed by "mai" in a not defined distance
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sequences with the consensus PROSITE pattern
PDOC00952
:
GDA1/CD39 family of nucleoside phosphatases
[LIVM]-x-G-x(2)-E-G-x-[FY]-x-[FW]-[LIVA]-[TAG]-x-N-[HY]
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You have a DNA or RNA sequence and want to know
if the translated sequence codes for an enzyme
start search
The database search is restricted to amino acid sequences of enzymes!
Amino acid Sequence
contains
exact
begins with
ends with
use * as joker
as regular expression
as DNA (forward and reverse)
as DNA 1st frame (forward)
as DNA 2nd frame (forward)
as DNA 3rd frame (forward)
as DNA 1st frame (reverse)
as DNA 2nd frame (reverse)
as DNA 3rd frame (reverse)
No. of results
10
20
50
100
Recommended name
(of enzyme)
contains
exact
begins with
ends with
use * as joker
EC Number
contains
exact
begins with
ends with
use * as joker
1st Accession Code
(UniProt)
contains
exact
begins with
ends with
use * as joker
Organism
contains
exact
begins with
ends with
use * as joker
Number of
amino acids
=
>
<
between
Molecular weight [Da]
=
>
<
between
Transmembrane helices
=
>
<
between
N-term
inside
outside
Source
SwissProt
TREMBL
