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Organism related
Word Map for Organism Vitreoscilla
- Vitreoscilla
- hemoglobin
- globin
-
vhb-expressing
- flavohemoglobins
- dermatitis
-
oxygen-limited
-
shake-flasks
-
nitrosative
-
co-difference
-
stercoraria
TaxTree of Organism Vitreoscilla
Condensed Tree View
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EC NUMBER 
COMMENTARY 
-
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(3R)-linalool biosynthesis
-
-
PWY-7709
(3S)-linalool biosynthesis
-
-
PWY-7141
(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)
-
-
PWY-7726
(8E,10E)-dodeca-8,10-dienol biosynthesis
-
-
PWY-7654
(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
-
-
PWY-7216
(R,R)-butanediol biosynthesis
-
-
PWY-5951
(R,R)-butanediol degradation
-
-
PWY3O-246
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
(S)-propane-1,2-diol degradation
-
-
PWY-7013
1,2-dichloroethane degradation
-
-
12DICHLORETHDEG-PWY
1,5-anhydrofructose degradation
-
-
PWY-6992
10-cis-heptadecenoyl-CoA degradation (yeast)
-
-
PWY-7337
10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
-
-
PWY-7339
10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
-
-
PWY-7338
2'-deoxymugineic acid phytosiderophore biosynthesis
-
-
PWY-5912
2,4-dinitrotoluene degradation
-
-
PWY-5642
2-amino-3-hydroxycyclopent-2-enone biosynthesis
-
-
PWY-7536
2-deoxy-D-ribose degradation II
-
-
PWY-8058
2-methyl-branched fatty acid beta-oxidation
-
-
PWY-8181
2-methylpropene degradation
-
-
PWY-7778
2-nitrotoluene degradation
-
-
PWY-5641
3-dehydroquinate biosynthesis I
-
-
PWY-6164
3-hydroxypropanoate/4-hydroxybutanate cycle
-
-
PWY-5789
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
3-phenylpropanoate degradation
-
-
P281-PWY
4-ethylphenol degradation (anaerobic)
-
-
PWY-6080
4-hydroxybenzoate biosynthesis III (plants)
-
-
PWY-6435
4-oxopentanoate degradation
-
-
PWY-7948
9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
-
-
PWY-7340
acetaldehyde biosynthesis I
-
-
PWY-6333
acetate and ATP formation from acetyl-CoA I
-
-
PWY0-1312
acetoacetate degradation (to acetyl CoA)
-
-
ACETOACETATE-DEG-PWY
acetone degradation I (to methylglyoxal)
-
-
PWY-5451
acetone degradation III (to propane-1,2-diol)
-
-
PWY-7466
acetyl-CoA fermentation to butanoate
-
-
PWY-5676
acetylene degradation (anaerobic)
-
-
P161-PWY
adenine and adenosine salvage VI
-
-
PWY-6619
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
all-trans-farnesol biosynthesis
-
-
PWY-6859
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
ammonia oxidation II (anaerobic)
-
-
P303-PWY
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
-
-
PWY-7384
androstenedione degradation I (aerobic)
-
-
PWY-6944
androstenedione degradation II (anaerobic)
-
-
PWY-8152
arachidonate metabolites biosynthesis
-
-
PWY-8397
arsenite to oxygen electron transfer
-
-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
-
-
PWY-7429
bacilysin biosynthesis
-
-
PWY-7626
baicalein degradation (hydrogen peroxide detoxification)
-
-
PWY-7214
benzoate biosynthesis I (CoA-dependent, beta-oxidative)
-
-
PWY-6443
benzoyl-CoA biosynthesis
-
-
PWY-6458
betanidin degradation
-
-
PWY-5461
Bifidobacterium shunt
-
-
P124-PWY
bisabolene biosynthesis (engineered)
-
-
PWY-7102
bupropion degradation
-
-
PWY66-241
butanol and isobutanol biosynthesis (engineered)
-
-
PWY-7396
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
-
-
PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
-
-
PWY-7117
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
catechol degradation to 2-hydroxypentadienoate I
-
-
P183-PWY
catechol degradation to 2-hydroxypentadienoate II
-
-
PWY-5419
CDP-6-deoxy-D-gulose biosynthesis
-
-
PWY-8139
cellulose degradation II (fungi)
-
-
PWY-6788
chitin biosynthesis
-
-
PWY-6981
chitin degradation I (archaea)
-
-
PWY-6855
chitin degradation II (Vibrio)
-
-
PWY-6902
chitin degradation III (Serratia)
-
-
PWY-7822
chlorpyrifos degradation
-
-
PWY-8065
cholesterol degradation to androstenedione I (cholesterol oxidase)
-
-
PWY-6945
cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
-
-
PWY-6946
CO2 fixation into oxaloacetate (anaplerotic)
-
-
PWYQT-4429
crotonate fermentation (to acetate and cyclohexane carboxylate)
-
-
PWY-7401
D-galactose degradation I (Leloir pathway)
-
-
PWY-6317
D-lactate to cytochrome bo oxidase electron transfer
-
-
PWY0-1565
D-sorbitol degradation I
-
-
PWY-4101
D-xylose degradation to ethylene glycol (engineered)
-
-
PWY-7178
deacetylcephalosporin C biosynthesis
-
-
PWY-5631
degradation of aromatic, nitrogen containing compounds
-
-
detoxification of reactive carbonyls in chloroplasts
-
-
PWY-6786
dimethyl sulfide biosynthesis from methionine
-
-
PWY-7793
docosahexaenoate biosynthesis III (6-desaturase, mammals)
-
-
PWY-7606
docosahexaenoate metabolites biosynthesis
-
-
PWY-8400
dTDP-beta-L-rhamnose biosynthesis
-
-
DTDPRHAMSYN-PWY
dTMP de novo biosynthesis (mitochondrial)
-
-
PWY66-385
erythritol biosynthesis I
-
-
PWY-8372
erythritol biosynthesis II
-
-
PWY-8373
erythromycin D biosynthesis
-
-
PWY-7106
ethanol degradation I
-
-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
-
PWY66-21
ethanol degradation IV
-
-
PWY66-162
ethanolamine utilization
-
-
PWY0-1477
ethene biosynthesis I (plants)
-
-
ETHYL-PWY
ethene biosynthesis III (microbes)
-
-
PWY-6854
ethene biosynthesis V (engineered)
-
-
PWY-7124
ethylbenzene degradation (anaerobic)
-
-
PWY-481
ethylmalonyl-CoA pathway
-
-
PWY-5741
fatty acid beta-oxidation I (generic)
-
-
FAO-PWY
fatty acid beta-oxidation II (plant peroxisome)
-
-
PWY-5136
fatty acid beta-oxidation VI (mammalian peroxisome)
-
-
PWY66-391
fatty acid beta-oxidation VII (yeast peroxisome)
-
-
PWY-7288
fatty acid salvage
-
-
PWY-7094
Fe(II) oxidation
-
-
PWY-6692
folate polyglutamylation
folate transformations I
-
-
PWY-2201
folate transformations II (plants)
-
-
PWY-3841
folate transformations III (E. coli)
-
-
1CMET2-PWY
formaldehyde assimilation I (serine pathway)
-
-
PWY-1622
gallate degradation III (anaerobic)
-
-
P3-PWY
gamma-hexachlorocyclohexane degradation
-
-
GAMMAHEXCHLORDEG-PWY
GDP-alpha-D-glucose biosynthesis
-
-
PWY-5661
geranyl diphosphate biosynthesis
-
-
PWY-5122
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
glucose and glucose-1-phosphate degradation
-
-
GLUCOSE1PMETAB-PWY
glucosylglycerol biosynthesis
-
-
PWY-7902
glutaryl-CoA degradation
-
-
PWY-5177
glutathione-peroxide redox reactions
-
-
PWY-4081
glycerol degradation I
-
-
PWY-4261
glycerol-3-phosphate to cytochrome bo oxidase electron transfer
-
-
PWY0-1561
glycerol-3-phosphate to fumarate electron transfer
-
-
PWY0-1582
glycine betaine degradation I
-
-
PWY-3661
glycine betaine degradation II (mammalian)
-
-
PWY-3661-1
glycine betaine degradation III
-
-
PWY-8325
glycine biosynthesis I
-
-
GLYSYN-PWY
glycine degradation (reductive Stickland reaction)
-
-
PWY-8015
glycogen biosynthesis I (from ADP-D-Glucose)
-
-
GLYCOGENSYNTH-PWY
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
-
-
PWY-7900
glycogen degradation I
-
-
GLYCOCAT-PWY
glycogen degradation II
-
-
PWY-5941
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
gossypol biosynthesis
-
-
PWY-5773
heterolactic fermentation
-
-
P122-PWY
hydrogen production III
-
-
PWY-6759
hydrogen production VI
-
-
PWY-6780
hydrogen production VIII
-
-
PWY-6785
hydrogen to fumarate electron transfer
-
-
PWY0-1576
icosapentaenoate metabolites biosynthesis
-
-
PWY-8399
incomplete reductive TCA cycle
-
-
P42-PWY
indole glucosinolate activation (herbivore attack)
-
-
PWYQT-4476
indole-3-acetate biosynthesis II
-
-
PWY-581
indole-3-acetate biosynthesis V (bacteria and fungi)
-
-
PWY-5026
inulin degradation
-
-
PWY-8314
ipsdienol biosynthesis
-
-
PWY-7410
isoprene biosynthesis II (engineered)
-
-
PWY-7391
isopropanol biosynthesis (engineered)
-
-
PWY-6876
jasmonic acid biosynthesis
-
-
PWY-735
justicidin B biosynthesis
-
-
PWY-6824
ketogenesis
-
-
PWY66-367
ketolysis
-
-
PWY66-368
L-alanine biosynthesis II
-
-
ALANINE-SYN2-PWY
L-alanine degradation II (to D-lactate)
-
-
ALACAT2-PWY
L-alanine degradation III
-
-
ALANINE-DEG3-PWY
L-alanine degradation V (oxidative Stickland reaction)
-
-
PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
-
-
PWY-8188
L-arginine biosynthesis I (via L-ornithine)
-
-
ARGSYN-PWY
L-arginine biosynthesis II (acetyl cycle)
-
-
ARGSYNBSUB-PWY
L-arginine biosynthesis IV (archaea)
-
-
PWY-7400
L-arginine degradation XIII (reductive Stickland reaction)
-
-
PWY-8187
L-arginine degradation XIV (oxidative Stickland reaction)
-
-
PWY-6344
L-asparagine biosynthesis I
-
-
ASPARAGINE-BIOSYNTHESIS
L-citrulline biosynthesis
-
-
CITRULBIO-PWY
L-citrulline degradation
-
-
CITRULLINE-DEG-PWY
L-glutamate degradation V (via hydroxyglutarate)
-
-
P162-PWY
L-glutamate degradation VII (to butanoate)
-
-
GLUDEG-II-PWY
L-histidine degradation V
-
-
PWY-5031
L-isoleucine degradation I
-
-
ILEUDEG-PWY
L-isoleucine degradation II
-
-
PWY-5078
L-leucine degradation III
-
-
PWY-5076
L-lysine degradation V
-
-
PWY-5283
L-lysine fermentation to acetate and butanoate
-
-
P163-PWY
L-methionine degradation I (to L-homocysteine)
-
-
METHIONINE-DEG1-PWY
L-methionine degradation III
-
-
PWY-5082
L-phenylalanine biosynthesis I
-
-
PHESYN
L-phenylalanine biosynthesis II
-
-
PWY-3462
L-phenylalanine degradation III
-
-
PWY-5079
L-phenylalanine degradation V
-
-
PWY-7158
L-threonine degradation I
-
-
PWY-5437
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tryptophan degradation X (mammalian, via tryptamine)
-
-
PWY-6307
L-tyrosine biosynthesis I
-
-
TYRSYN
L-tyrosine biosynthesis II
-
-
PWY-3461
L-tyrosine biosynthesis III
-
-
PWY-6120
L-tyrosine degradation III
-
-
PWY3O-4108
L-valine degradation II
-
-
PWY-5057
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
-
-
PWY-8377
lanosterol biosynthesis
-
-
PWY-6132
linalool biosynthesis I
-
-
PWY-7182
linoleate metabolites biosynthesis
-
-
PWY-8395
luteolin triglucuronide degradation
-
-
PWY-7445
malate/L-aspartate shuttle pathway
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
manganese oxidation I
-
-
PWY-6591
maresin biosynthesis
-
-
PWY-8356
matairesinol biosynthesis
-
-
PWY-5466
melatonin degradation I
-
-
PWY-6398
menaquinol-4 biosynthesis II
-
-
PWY-7998
Methanobacterium thermoautotrophicum biosynthetic metabolism
-
-
PWY-6146
methanogenesis from acetate
-
-
METH-ACETATE-PWY
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methyl parathion degradation
-
-
PWY-5489
methyl phomopsenoate biosynthesis
-
-
PWY-7721
methyl tert-butyl ether degradation
-
-
PWY-7779
methylaspartate cycle
methylerythritol phosphate pathway I
-
-
NONMEVIPP-PWY
methylerythritol phosphate pathway II
-
-
PWY-7560
mevalonate pathway I (eukaryotes and bacteria)
-
-
PWY-922
mevalonate pathway II (haloarchaea)
-
-
PWY-6174
mevalonate pathway III (Thermoplasma)
-
-
PWY-7524
mevalonate pathway IV (archaea)
-
-
PWY-8125
mitochondrial NADPH production (yeast)
-
-
PWY-7269
mixed acid fermentation
-
-
FERMENTATION-PWY
mono-trans, poly-cis decaprenyl phosphate biosynthesis
-
-
PWY-6383
mucin core 3 and core 4 O-glycosylation
-
-
PWY-7435
NAD(P)/NADPH interconversion
-
-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
-
-
PWY0-1334
NADH to cytochrome bd oxidase electron transfer II
-
-
PWY0-1568
NADH to cytochrome bo oxidase electron transfer I
-
-
PWY0-1335
NADH to cytochrome bo oxidase electron transfer II
-
-
PWY0-1567
NADH to fumarate electron transfer
-
-
PWY0-1336
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
nicotine degradation IV
-
-
PWY66-201
nicotine degradation V
-
-
PWY66-221
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
-
-
PWY-381
nitrate reduction VII (denitrification)
-
-
PWY-6748
nitrate reduction VIIIb (dissimilatory)
-
-
PWY0-1573
nitrifier denitrification
-
-
PWY-7084
nitrite-dependent anaerobic methane oxidation
-
-
PWY-6523
nitrogen remobilization from senescing leaves
-
-
PWY-6549
nocardicin A biosynthesis
-
-
PWY-7797
noradrenaline and adrenaline degradation
-
-
PWY-6342
oleate beta-oxidation
-
-
PWY0-1337
paraoxon degradation
-
-
PWY-5490
parathion degradation
-
-
PARATHION-DEGRADATION-PWY
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
phenylethanol biosynthesis
-
-
PWY-5751
phosphopantothenate biosynthesis I
-
-
PANTO-PWY
photorespiration I
-
-
PWY-181
photorespiration II
-
-
PWY-8362
photorespiration III
-
-
PWY-8363
phytol degradation
-
-
PWY66-389
platensimycin biosynthesis
-
-
PWY-8179
poly-hydroxy fatty acids biosynthesis
-
-
PWY-6710
polyhydroxybutanoate biosynthesis
-
-
PWY1-3
polyhydroxydecanoate biosynthesis
-
-
PWY-6657
polyphosphate metabolism
-
-
PWY-8138
proline to cytochrome bo oxidase electron transfer
-
-
PWY0-1544
propanoate fermentation to 2-methylbutanoate
-
-
PWY-5109
purine nucleobases degradation I (anaerobic)
-
-
P164-PWY
purine nucleobases degradation II (anaerobic)
-
-
PWY-5497
pyruvate fermentation to (R)-lactate
-
-
PWY-8274
pyruvate fermentation to (S)-lactate
-
-
PWY-5481
pyruvate fermentation to acetate II
-
-
PWY-5482
pyruvate fermentation to acetate IV
-
-
PWY-5485
pyruvate fermentation to acetone
-
-
PWY-6588
pyruvate fermentation to butanoate
-
-
CENTFERM-PWY
pyruvate fermentation to butanol I
-
-
PWY-6583
pyruvate fermentation to butanol II (engineered)
-
-
PWY-6883
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to hexanol (engineered)
-
-
PWY-6863
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
pyruvate fermentation to propanoate I
-
-
P108-PWY
pyruvate to cytochrome bo oxidase electron transfer
-
-
PWY-7544
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive glycine pathway of autotrophic CO2 fixation
-
-
PWY-8303
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
retinol biosynthesis
-
-
PWY-6857
S-adenosyl-L-methionine biosynthesis
-
-
SAM-PWY
S-adenosyl-L-methionine salvage I
-
-
PWY-6151
S-adenosyl-L-methionine salvage II
-
-
PWY-5041
salidroside biosynthesis
-
-
PWY-6802
salinosporamide A biosynthesis
-
-
PWY-6627
seleno-amino acid detoxification and volatilization I
-
-
PWY-6931
seleno-amino acid detoxification and volatilization III
-
-
PWY-6933
serotonin degradation
-
-
PWY-6313
sesamin biosynthesis
-
-
PWY-5469
sitosterol degradation to androstenedione
-
-
PWY-6948
starch biosynthesis
-
-
PWY-622
starch degradation III
-
-
PWY-6731
starch degradation V
-
-
PWY-6737
stellatic acid biosynthesis
-
-
PWY-7736
streptomycin biosynthesis
-
-
PWY-5940
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome bd oxidase electron transfer
-
-
PWY0-1353
succinate to cytochrome bo oxidase electron transfer
-
-
PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
succinate to plastoquinol oxidase
-
-
PWY1YI0-8
sucrose biosynthesis II
-
-
PWY-7238
sucrose degradation II (sucrose synthase)
-
-
PWY-3801
sucrose degradation III (sucrose invertase)
-
-
PWY-621
sucrose degradation IV (sucrose phosphorylase)
-
-
PWY-5384
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
superpathway of photosynthetic hydrogen production
-
-
PWY-7731
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VI (Helicobacter)
-
-
REDCITCYC
TCA cycle VII (acetate-producers)
-
-
PWY-7254
TCA cycle VIII (Chlamydia)
-
-
TCA-1
teichuronic acid biosynthesis (B. subtilis 168)
-
-
PWY-7820
tetrahydropteridine recycling
-
-
PWY-8099
tetrapyrrole biosynthesis I (from glutamate)
-
-
PWY-5188
tetrapyrrole biosynthesis II (from glycine)
-
-
PWY-5189
toluene degradation II (aerobic) (via 4-methylcatechol)
-
-
TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
-
-
TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
-
-
TOLUENE-DEG-2-OH-PWY
trans, trans-farnesyl diphosphate biosynthesis
-
-
PWY-5123
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
PWY-5410
trehalose degradation V
-
-
PWY-2723
triacylglycerol degradation
-
-
LIPAS-PWY
UDP-alpha-D-glucose biosynthesis
-
-
PWY-7343
UDP-alpha-D-glucuronate biosynthesis (from UDP-glucose)
-
-
PWY-7346
urea cycle
valproate beta-oxidation
-
-
PWY-8182
vancomycin resistance I
-
-
PWY-6454
vanillin biosynthesis I
-
-
PWY-5665
viridicatumtoxin biosynthesis
-
-
PWY-7659
vitamin K-epoxide cycle
xanthommatin biosynthesis
-
-
PWY-8249
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
folate polyglutamylation
-
-
PWY-2161
methylaspartate cycle
-
-
PWY-6728
urea cycle
-
-
PWY-4984
vitamin K-epoxide cycle
-
-
PWY-7999
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
LINKS TO OTHER DATABASES (specific for Vitreoscilla)
SILVA: 16S/18S rRNA, 23S/28S rRNA
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Release 2023.1 (January 2023)
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