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Literature summary for 5.3.1.6 extracted from

  • Edwards, T.E.; Abramov, A.B.; Smith, E.R.; Baydo, R.O.; Leonard, J.T.; Leibly, D.J.; Thompkins, K.B.; Clifton, M.C.; Gardberg, A.S.; Staker, B.L.; Van Voorhis, W.C.; Myler, P.J.; Stewart, L.J.
    Structural characterization of a ribose-5-phosphate isomerase B from the pathogenic fungus Coccidioides immitis (2011), BMC Struct. Biol., 11, 39.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

Cloned (Comment) Organism
expressed in Escherichia coli BL21 (DE3) R3 Rosetta cells Coccidioides immitis

Crystallization (Commentary)

Crystallization (Comment) Organism
co-crystallization in the presence of 20 mM ribose-5-phosphate or 20 mM ribose-5-phosphate with 12 mM MnCl2, sitting drop vapor diffusion method, using 0.1 M Na citrate pH 5.0, 20% (w/v) PEG 6000 Coccidioides immitis

Inhibitors

Inhibitors Comment Organism Structure
iodoacetic acid suicide inhibitor Coccidioides immitis

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
D-ribose 5-phosphate Coccidioides immitis
-
D-ribulose 5-phosphate
-
r

Organism

Organism UniProt Comment Textmining
Coccidioides immitis P0CL19
-
-

Purification (Commentary)

Purification (Comment) Organism
Ni-NTA column chromatography and Superdex 75 gel filtration Coccidioides immitis

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
D-ribose 5-phosphate
-
Coccidioides immitis D-ribulose 5-phosphate
-
r

Synonyms

Synonyms Comment Organism
ribose-5-phosphate isomerase B
-
Coccidioides immitis
RpiB
-
Coccidioides immitis