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Literature summary for 4.2.1.51 extracted from

  • Zhang, S.; Wilson, D.B.; Ganem, B.
    Probing the catalytic mechanism of prephenate dehydratase by site-directed mutagenesis of the Escherichia coli P-protein dehydratase domain (2000), Biochemistry, 39, 4722-4728.
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
expression of mutant enzymes in enzyme deficient strain NK6024, subcloning in strain DH5alpha, overexpression of the isolated His-tagged wild-type prephenate dehydratase domain in strain BL21(DE3) Escherichia coli

Protein Variants

Protein Variants Comment Organism
C216A site-directed mutagenesis, inactive mutant Escherichia coli
C216S site-directed mutagenesis, increased activity Escherichia coli
E159A site-directed mutagenesis, 2.2fold increased activity Escherichia coli
E159A/E232A site-directed mutagenesis, 7fold increased kcat, 4.6fold decreased Km compared to the wild-type, increased activity Escherichia coli
E232A site-directed mutagenesis, 3.5fold increased activity Escherichia coli
H209A site-directed mutagenesis, highly reduced activity Escherichia coli
N160A site-directed mutagenesis, 500fold decreased activity Escherichia coli
N160D site-directed mutagenesis, highly reduced activity Escherichia coli
Q215A site-directed mutagenesis, 500fold decreased activity Escherichia coli
S208A site-directed mutagenesis, 100fold decreased activity Escherichia coli
S208C site-directed mutagenesis, 100fold decreased activity Escherichia coli
S208D site-directed mutagenesis, inactive mutant Escherichia coli
T278A site-directed mutagenesis, catalytically inactive mutant, but binds to substrate and inhibitor Escherichia coli
T278S site-directed mutagenesis, 100fold decreased activity Escherichia coli
T278V site-directed mutagenesis, catalytically inactive mutant, but binds to substrate and inhibitor Escherichia coli
W226A site-directed mutagenesis, nearly inactive mutant Escherichia coli
W226L site-directed mutagenesis, highly reduced activity Escherichia coli

Inhibitors

Inhibitors Comment Organism Structure
L-phenylalanine feedback inhibition Escherichia coli

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
additional information
-
additional information Km for chorismate of wild-type and mutants Escherichia coli
0.12
-
prephenate mutant E159A/E232A, 37°C Escherichia coli
0.16
-
prephenate mutant E232A, 37°C Escherichia coli
0.25
-
prephenate mutant E159A, 37°C Escherichia coli
0.56
-
prephenate native P-protein, 37°C Escherichia coli
0.57
-
prephenate mutant T278S, 37°C Escherichia coli
0.65
-
prephenate recombinant prephenate dehydratase domain, 37°C Escherichia coli
1.65
-
prephenate mutant N160A, 37°C Escherichia coli
2.09
-
prephenate mutant C216S, 37°C Escherichia coli
3
-
prephenate above, mutant W226L, 37°C Escherichia coli

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
prephenate Escherichia coli involved in biosynthesis of L-phenylalanine phenylpyruvate + H2O + CO2
-
?

Organism

Organism UniProt Comment Textmining
Escherichia coli
-
bifunctional enzyme
-

Purification (Commentary)

Purification (Comment) Organism
recombinant wild-type prephenate dehydratase domain and the mutant enzymes Escherichia coli

Reaction

Reaction Comment Organism Reaction ID
prephenate = phenylpyruvate + H2O + CO2 this enzyme in the enteric bacteria also possesses chorismate mutase activity, EC 5.4.99.5, and converts chorismate into prephenate, catalytic mechanism, T278 is involved in catalysis Escherichia coli

Specific Activity [micromol/min/mg]

Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
additional information
-
substrate specificity of the bifunctional enzyme, activity of mutant enzymes, overview Escherichia coli
18.2
-
crude native cell extract Escherichia coli
37.6
-
purified recombinant prephenate dehydratase domain Escherichia coli
40.4
-
purified recombinant mutant E159A Escherichia coli
42.9
-
purified recombinant mutant E232A Escherichia coli
56.9
-
purified recombinant double mutant E159A/E232A Escherichia coli

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
prephenate
-
Escherichia coli phenylpyruvate + H2O + CO2
-
?
prephenate involved in biosynthesis of L-phenylalanine Escherichia coli phenylpyruvate + H2O + CO2
-
?

Subunits

Subunits Comment Organism
More the enzyme consists of 3 domains: a chorismate mutase domain, a prephenate dehydratase domain, and a regulatory domain Escherichia coli

Synonyms

Synonyms Comment Organism
P-protein
-
Escherichia coli
P-protein dehydratase
-
Escherichia coli

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
37
-
assay at Escherichia coli

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
additional information
-
additional information kcat for chorismate of wild-type and mutants Escherichia coli
0.22
-
prephenate mutant N160A, 37°C Escherichia coli
0.41
-
prephenate mutant T278S, 37°C Escherichia coli
20
-
prephenate mutant W226L, 37°C Escherichia coli
32
-
prephenate native P-protein, 37°C Escherichia coli
32
-
prephenate recombinant prephenate dehydratase domain, 37°C Escherichia coli
35
-
prephenate mutant C216S, 37°C Escherichia coli
40
-
prephenate mutant E232A, 37°C Escherichia coli
42
-
prephenate mutant E159A, 37°C Escherichia coli
49
-
prephenate mutant E159A/E232A, 37°C Escherichia coli

Ki Value [mM]

Ki Value [mM] Ki Value maximum [mM] Inhibitor Comment Organism Structure
additional information
-
additional information
-
Escherichia coli