Activating Compound | Comment | Organism | Structure |
---|---|---|---|
citrate | enhances activity | Thermococcus kodakarensis |
Cloned (Comment) | Organism |
---|---|
expression in Escherichia coli | Thermococcus kodakarensis |
Inhibitors | Comment | Organism | Structure |
---|---|---|---|
Zn2+ | 1 mM, 35% decrease in activity | Thermococcus kodakarensis |
KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|
0.81 | - |
2-deoxy-D-ribose 5-phosphate | 95°C | Thermococcus kodakarensis |
Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
---|---|---|---|
24500 | - |
2 * 24500, SDS-PAGE | Thermococcus kodakarensis |
53000 | - |
gel filtration | Thermococcus kodakarensis |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
2-deoxy-D-ribose 5-phosphate | Thermococcus kodakarensis | presence of a novel phosphopentomutase and a 2-deoxyribose 5-phosphate aldolase reveals a metabolic link between pentoses and central carbon metabolism. Alternative route for pentose biosynthesis trough the function of the novel phosphopentomutase and a 2-deoxyribose 5-phosphate aldolase | D-glyceraldehyde 3-phosphate + acetaldehyde | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Thermococcus kodakarensis | Q877I0 | KOD1 | - |
Purification (Comment) | Organism |
---|---|
- |
Thermococcus kodakarensis |
Specific Activity Minimum [µmol/min/mg] | Specific Activity Maximum [µmol/min/mg] | Comment | Organism |
---|---|---|---|
285 | - |
pH 4.0, 95°C | Thermococcus kodakarensis |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
2-deoxy-D-ribose 5-phosphate | - |
Thermococcus kodakarensis | D-glyceraldehyde 3-phosphate + acetaldehyde | - |
? | |
2-deoxy-D-ribose 5-phosphate | presence of a novel phosphopentomutase and a 2-deoxyribose 5-phosphate aldolase reveals a metabolic link between pentoses and central carbon metabolism. Alternative route for pentose biosynthesis trough the function of the novel phosphopentomutase and a 2-deoxyribose 5-phosphate aldolase | Thermococcus kodakarensis | D-glyceraldehyde 3-phosphate + acetaldehyde | - |
? |
Subunits | Comment | Organism |
---|---|---|
dimer | 2 * 24500, SDS-PAGE | Thermococcus kodakarensis |
Synonyms | Comment | Organism |
---|---|---|
DERA | - |
Thermococcus kodakarensis |
TK2104 | - |
Thermococcus kodakarensis |
Temperature Optimum [°C] | Temperature Optimum Maximum [°C] | Comment | Organism |
---|---|---|---|
95 | - |
- |
Thermococcus kodakarensis |
Temperature Minimum [°C] | Temperature Maximum [°C] | Comment | Organism |
---|---|---|---|
85 | 100 | 85°C: about 35% of maximal activity, 100°C: about 95% of maximal activity | Thermococcus kodakarensis |
Turnover Number Minimum [1/s] | Turnover Number Maximum [1/s] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|
116 | - |
2-deoxy-D-ribose 5-phosphate | 95°C | Thermococcus kodakarensis |
pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
---|---|---|---|
4 | - |
- |
Thermococcus kodakarensis |