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Literature summary for 3.5.1.88 extracted from

  • Ngo, P.T.; Kim, J.K.; Kim, H.; Jung, J.; Ahn, Y.J.; Kim, J.G.; Lee, B.M.; Kang, L.W.
    Expression, crystallization and preliminary X-ray crystallographic analysis of peptide deformylase from Xanthomonas oryzae pv. oryzae (2008), Acta Crystallogr. Sect. F, 64, 1031-1033.
    View publication on PubMedView publication on EuropePMC

Application

Application Comment Organism
biotechnology peptide deformylase is a target protein for developing antibacterial drugs against Xanthomonas oryzae pv. oryzae Xanthomonas oryzae pv. oryzae

Cloned(Commentary)

Cloned (Comment) Organism
the coding region of amino-acid residues 43-212 is cloned into the vector pET11a for expression in Escherichia coli BL21DE3 cells Xanthomonas oryzae pv. oryzae

Crystallization (Commentary)

Crystallization (Comment) Organism
native peptide deformylase crystals diffract to 2.7 A resolution Xanthomonas oryzae pv. oryzae

Metals/Ions

Metals/Ions Comment Organism Structure
Fe2+
-
Xanthomonas oryzae pv. oryzae

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
additional information Xanthomonas oryzae pv. oryzae catalyzes the removal of the N-formyl group from the N-terminus of newly synthesized polypeptides ?
-
?

Organism

Organism UniProt Comment Textmining
Xanthomonas oryzae pv. oryzae
-
-
-

Purification (Commentary)

Purification (Comment) Organism
using a Bio-Gel P60, a Bio-Gel P100 and an UNO Q6 column Xanthomonas oryzae pv. oryzae

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
additional information catalyzes the removal of the N-formyl group from the N-terminus of newly synthesized polypeptides Xanthomonas oryzae pv. oryzae ?
-
?

Synonyms

Synonyms Comment Organism
peptide deformylase
-
Xanthomonas oryzae pv. oryzae