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Literature summary for 2.7.1.159 extracted from

  • Chen, X.; Yuan, L.; Ludewig, U.
    Natural genetic variation of seed micronutrients of Arabidopsis thaliana grown in zinc-deficient and zinc-amended soil (2016), Front. Plant Sci., 7, 1070.
    View publication on PubMedView publication on EuropePMC
Search for more literature for 2.7.1.159

Cloned(Commentary)

Cloned (Comment) Organism
gene itpk3-1, genotyping, 108 different accessions, the Arabidopsis accessions differ in their response to Zn deficiency, quantitative real-time PCR enzyme expression anaysis, overview Arabidopsis thaliana

Protein Variants

Protein Variants Comment Organism
additional information construction of the homogenous At4g08170 mutant (SALK_120653C, NASCcode N653925) carrying a T-DNA insertion in the intron in wild-type line Col-0 Arabidopsis thaliana

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+ required Arabidopsis thaliana

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
ATP + 1D-myo-inositol 1,3,4-trisphosphate Arabidopsis thaliana
-
 ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate
-
 ?
ATP + 1D-myo-inositol 1,3,4-trisphosphate Arabidopsis thaliana
-
 ADP + 1D-myo-inositol 1,3,4,6-tetrakisphosphate
-
 ?
ATP + 1D-myo-inositol 1,3,4-trisphosphate Arabidopsis thaliana Col-0
-
 ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate
-
 ?
ATP + 1D-myo-inositol 1,3,4-trisphosphate Arabidopsis thaliana Col-0
-
 ADP + 1D-myo-inositol 1,3,4,6-tetrakisphosphate
-
 ?

Organism

Organism UniProt Comment Textmining
Arabidopsis thaliana Q9SUG3 108 accessions, gene itpk3-1
-
Arabidopsis thaliana Col-0 Q9SUG3 108 accessions, gene itpk3-1
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
ATP + 1D-myo-inositol 1,3,4-trisphosphate
-
 Arabidopsis thaliana ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate
-
 ?
ATP + 1D-myo-inositol 1,3,4-trisphosphate
-
 Arabidopsis thaliana Col-0 ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate
-
 ?
ATP + 1D-myo-inositol 1,3,4-trisphosphate
-
 Arabidopsis thaliana ADP + 1D-myo-inositol 1,3,4,6-tetrakisphosphate
-
 ?
ATP + 1D-myo-inositol 1,3,4-trisphosphate
-
 Arabidopsis thaliana Col-0 ADP + 1D-myo-inositol 1,3,4,6-tetrakisphosphate
-
 ?
additional information the enzyme also performs the reaction of EC 2.7.1.134, phosphorylation of position 1 of 1D-myo-inositol 3,4,5,6-tetrakisphosphate Arabidopsis thaliana ?
-
 ?
additional information the enzyme also performs the reaction of EC 2.7.1.134, phosphorylation of position 1 of 1D-myo-inositol 3,4,5,6-tetrakisphosphate Arabidopsis thaliana Col-0 ?
-
 ?

Synonyms

Synonyms Comment Organism
inositol 1,3,4-trisphosphate 5/6-kinase
-
 Arabidopsis thaliana
ITPK3
-
 Arabidopsis thaliana
More cf. EC 2.7.1.134 Arabidopsis thaliana

Cofactor

Cofactor Comment Organism Structure
ATP
-
 Arabidopsis thaliana

General Information

General Information Comment Organism
malfunction loss of this gene in itpk3-1 does neither affect phytate seed levels, nor seed Zn, Fe, and Mn but the micronutrient bioavailability is strongly reduced by seed phytate that forms complexes with seed cations. Low seed zinc is primarily caused by plant growth in Zn-deficient soil Arabidopsis thaliana
metabolism measurement of Fe, Zn, and Mn concentrations in seeds of Arabidopsis thaliana accessions grown in Zn-deficient and Zn-amended conditions, overview. Inositol 1,3,4-trisphosphate 5/6-kinase 3 gene (ITPK3), located close to a significant nucleotide polymorphism associated with relative Zn seed concentrations, is dispensable for seed micronutrients accumulation in ecotype Col-0 Arabidopsis thaliana