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Literature summary for 2.4.2.28 extracted from

  • Appleby, T.C.; Mathews, I.I.; Porcelli, M.; Cacciapuoti, G.; Ealick, S.E.
    Three-dimensional structure of a hyperthermophilic 5'-deoxy-5'-methylthioadenosine phosphorylase from Sulfolobus solfataricus (2001), J. Biol. Chem., 276, 39232-39242.
    View publication on PubMed

Crystallization (Commentary)

Crystallization (Comment) Organism
crystals are grown at either room temperature or 18°C using the hanging drop vapor diffusion technique. Determination of the structure of 5'-deoxy-5'-methylthioadenosine phosphorylase alone, as ternary complexes with sulfate plus substrates 5'-deoxy-5'-methylthioadenosine, adenosine, or guanosine, or with the noncleavable substrate analog formycin B and as binary complexes with phosphate or sulfate alone. The structure of unliganded SsMTAP is refined at 2.5 A resolution and the structures of the complexes are refined at resolutions ranging from 1.6 A to 2.0 A Saccharolobus solfataricus

Organism

Organism UniProt Comment Textmining
Saccharolobus solfataricus
-
-
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Saccharolobus solfataricus P50389
-
-

Purification (Commentary)

Purification (Comment) Organism
recombinant from Escherichia coli Saccharolobus solfataricus

Reaction

Reaction Comment Organism Reaction ID
S-methyl-5'-thioadenosine + phosphate = adenine + S-methyl-5-thio-alpha-D-ribose 1-phosphate catalytic mechanism Saccharolobus solfataricus
S-methyl-5'-thioadenosine + phosphate = adenine + S-methyl-5-thio-alpha-D-ribose 1-phosphate active and substrate-binding sites, three-dimensional structures Saccharolobus solfataricus
S-methyl-5'-thioadenosine + phosphate = adenine + S-methyl-5-thio-alpha-D-ribose 1-phosphate subunit structure, model Saccharolobus solfataricus

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
5'-deoxy-5'-methylthioadenosine + phosphate substrate-induced conformational change involving Glu163, which is located at the interface between subunits and swings in toward the active site upon nucleoside binding Saccharolobus solfataricus adenine + 5-methylthio-D-ribose 1-phosphate
-
?
5'-deoxy-5'-methylthioadenosine + phosphate the transition state is stabilized in different ways for 6-amino versus 6-oxo substrates Saccharolobus solfataricus adenine + 5-methylthio-D-ribose 1-phosphate
-
?

Subunits

Subunits Comment Organism
hexamer
-
Saccharolobus solfataricus
More enzyme is formed by a trimer of dimers with three symmetric intersubunit disulfide bonds linking the dimers to one another, each monomer contains one active site, which is located near a dimer interface Saccharolobus solfataricus

Synonyms

Synonyms Comment Organism
5'-deoxy-5'-methylthioadenosine phosphorylase
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Saccharolobus solfataricus
SsMTAP
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Saccharolobus solfataricus

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
120
-
-
Saccharolobus solfataricus
120
-
recombinant enzyme Saccharolobus solfataricus

Temperature Stability [°C]

Temperature Stability Minimum [°C] Temperature Stability Maximum [°C] Comment Organism
additional information
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disulfide linkages play a key role in thermal stability Saccharolobus solfataricus
100
-
2 h, stable Saccharolobus solfataricus
110
-
recombinant enzyme, 2 h, stable Saccharolobus solfataricus
120
-
-
Saccharolobus solfataricus