Cloned (Comment) | Organism |
---|---|
gene dmdA, genetic cluster identification from 578 dmdA sequences from seawater plankton probes, DNA and amino acid sequence determination and analysis, phylogenetic analysis | Roseobacter sp. |
gene dmdA, genetic cluster identification from 578 dmdA sequences from seawater plankton probes, DNA and amino acid sequence determination and analysis, phylogenetic analysis | Candidatus Pelagibacter ubique |
gene dmdA, genetic cluster identification from 578 dmdA sequences from seawater plankton probes, DNA and amino acid sequence determination and analysis, phylogenetic analysis | Candidatus Puniceispirillum marinum |
gene dmdA, genetic cluster identification from 578 dmdA sequences from seawater plankton probes, DNA and amino acid sequence determination and analysis, phylogenetic analysis | unidentified marine bacterioplankton |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Candidatus Pelagibacter ubique | - |
pelagibacteraceae, in phytoplankton bloom in Gulf of Mexico seawater, gene dmdA, SAR11 group, clade C, genetic cluster identification from 578 dmdA sequences | - |
Candidatus Pelagibacter ubique | - |
pelagibacteraceae, strains HTCC1002 and HTCC1062, in phytoplankton bloom in Gulf of Mexico seawater, gene dmdA, SAR11 group, clade D, genetic cluster identification from 578 dmdA sequences | - |
Candidatus Pelagibacter ubique HTCC7211 | - |
pelagibacteraceae, in phytoplankton bloom in Gulf of Mexico seawater, gene dmdA, SAR11 group, clade C, genetic cluster identification from 578 dmdA sequences | - |
Candidatus Puniceispirillum marinum | - |
pelagibacteraceae, in phytoplankton bloom in Gulf of Mexico seawater, gene dmdA, SAR11 group, clade B, genetic cluster identification from 578 dmdA sequences | - |
Flavobacteriaceae | - |
in phytoplankton bloom in Gulf of Mexico seawater, gene dmdA, genetic cluster identification from 578 dmdA sequences | - |
Rhodobacterales | - |
in phytoplankton bloom in Gulf of Mexico seawater, gene dmdA, OM60 group, genetic cluster OM60-like identification from 578 dmdA sequences | - |
Rhodospirillales | - |
in phytoplankton bloom in Gulf of Mexico seawater, gene dmdA, clade A, genetic cluster identification from 578 dmdA sequences | - |
Roseobacter sp. | - |
in phytoplankton bloom in Gulf of Mexico seawater, gene dmdA, clade A, genetic cluster identification from 578 dmdA sequences | - |
Sphingomonadales | - |
in phytoplankton bloom in Gulf of Mexico seawater, gene dmdA, OM60 group, genetic cluster OM60-like identification from 578 dmdA sequences | - |
unidentified marine bacterioplankton | - |
pelagibacteraceae, strains HTCC1002 and HTCC1062, in phytoplankton bloom in Gulf of Mexico seawater, gene dmdA, OM60 group, clade E, genetic cluster identification from 578 dmdA sequences | - |
unidentified marine bacterioplankton HTCC2080 | - |
pelagibacteraceae, strains HTCC1002 and HTCC1062, in phytoplankton bloom in Gulf of Mexico seawater, gene dmdA, OM60 group, clade E, genetic cluster identification from 578 dmdA sequences | - |
Synonyms | Comment | Organism |
---|---|---|
DmdA | - |
Roseobacter sp. |
DmdA | - |
Candidatus Pelagibacter ubique |
DmdA | - |
Rhodobacterales |
DmdA | - |
Flavobacteriaceae |
DmdA | - |
Candidatus Puniceispirillum marinum |
DmdA | - |
Sphingomonadales |
DmdA | - |
Rhodospirillales |
DmdA | - |
unidentified marine bacterioplankton |
DMSP demethylase | - |
Roseobacter sp. |
DMSP demethylase | - |
Candidatus Pelagibacter ubique |
DMSP demethylase | - |
Rhodobacterales |
DMSP demethylase | - |
Flavobacteriaceae |
DMSP demethylase | - |
Candidatus Puniceispirillum marinum |
DMSP demethylase | - |
Sphingomonadales |
DMSP demethylase | - |
Rhodospirillales |
DMSP demethylase | - |
unidentified marine bacterioplankton |
General Information | Comment | Organism |
---|---|---|
metabolism | the enzyme catalyzes the first step of the dimethylsulfoniopropionate, DMSP, cleavage pathway. DMSP is a ubiquitous phytoplankton metabolite that is degraded by marine microorganisms by at least two major pathways | Roseobacter sp. |
metabolism | the enzyme catalyzes the first step of the dimethylsulfoniopropionate, DMSP, cleavage pathway. DMSP is a ubiquitous phytoplankton metabolite that is degraded by marine microorganisms by at least two major pathways | Candidatus Pelagibacter ubique |
metabolism | the enzyme catalyzes the first step of the dimethylsulfoniopropionate, DMSP, cleavage pathway. DMSP is a ubiquitous phytoplankton metabolite that is degraded by marine microorganisms by at least two major pathways | Rhodobacterales |
metabolism | the enzyme catalyzes the first step of the dimethylsulfoniopropionate, DMSP, cleavage pathway. DMSP is a ubiquitous phytoplankton metabolite that is degraded by marine microorganisms by at least two major pathways | Flavobacteriaceae |
metabolism | the enzyme catalyzes the first step of the dimethylsulfoniopropionate, DMSP, cleavage pathway. DMSP is a ubiquitous phytoplankton metabolite that is degraded by marine microorganisms by at least two major pathways | Candidatus Puniceispirillum marinum |
metabolism | the enzyme catalyzes the first step of the dimethylsulfoniopropionate, DMSP, cleavage pathway. DMSP is a ubiquitous phytoplankton metabolite that is degraded by marine microorganisms by at least two major pathways | Sphingomonadales |
metabolism | the enzyme catalyzes the first step of the dimethylsulfoniopropionate, DMSP, cleavage pathway. DMSP is a ubiquitous phytoplankton metabolite that is degraded by marine microorganisms by at least two major pathways | Rhodospirillales |
metabolism | the enzyme catalyzes the first step of the dimethylsulfoniopropionate, DMSP, cleavage pathway. DMSP is a ubiquitous phytoplankton metabolite that is degraded by marine microorganisms by at least two major pathways | unidentified marine bacterioplankton |