Localization | Comment | Organism | GeneOntology No. | Textmining |
---|---|---|---|---|
periplasm | - |
Rhodovulum sulfidophilum | - |
- |
Metals/Ions | Comment | Organism | Structure |
---|---|---|---|
Iron | the enzyme contains 17 mol iron per mol enzyme | Rhodovulum sulfidophilum | |
Molybdenum | the enzyme contains 0.5 mol molybdenum per mol enzyme | Rhodovulum sulfidophilum |
Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
---|---|---|---|
32000 | - |
subunit DdhC | Rhodovulum sulfidophilum |
32000 | - |
1 * 94000 + 1 * 38000 + 1 * 32000 | Rhodovulum sulfidophilum |
38000 | - |
subunit DdhB | Rhodovulum sulfidophilum |
38000 | - |
1 * 94000 + 1 * 38000 + 1 * 32000 | Rhodovulum sulfidophilum |
94000 | - |
subunit DdhA | Rhodovulum sulfidophilum |
94000 | - |
1 * 94000 + 1 * 38000 + 1 * 32000 | Rhodovulum sulfidophilum |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
dimethyl sulfide + ferricytochrome c2 + H2O | Rhodovulum sulfidophilum | - |
dimethyl sulfoxide + ferrocytochrome c2 | - |
? | |
dimethyl sulfide + ferricytochrome c2 + H2O | Rhodovulum sulfidophilum SH1 | - |
dimethyl sulfoxide + ferrocytochrome c2 | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Rhodovulum sulfidophilum | Q8GPG1 | subunit gamma (DdhC) | - |
Rhodovulum sulfidophilum | Q8GPG3 | subunit beta (DdhB) | - |
Rhodovulum sulfidophilum | Q8GPG4 | subunit alpha (DdhA) | - |
Rhodovulum sulfidophilum SH1 | Q8GPG1 | subunit gamma (DdhC) | - |
Rhodovulum sulfidophilum SH1 | Q8GPG3 | subunit beta (DdhB) | - |
Rhodovulum sulfidophilum SH1 | Q8GPG4 | subunit alpha (DdhA) | - |
Purification (Comment) | Organism |
---|---|
Poros 20HQ Strong anion exchange column chromatography and gel filtration | Rhodovulum sulfidophilum |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
dimethyl sulfide + ferricytochrome c2 + H2O | - |
Rhodovulum sulfidophilum | dimethyl sulfoxide + ferrocytochrome c2 | - |
? | |
dimethyl sulfide + ferricytochrome c2 + H2O | - |
Rhodovulum sulfidophilum SH1 | dimethyl sulfoxide + ferrocytochrome c2 | - |
? | |
dimethyl sulfide + oxidized 2,6-dichlorophenolindophenol + H2O | - |
Rhodovulum sulfidophilum | dimethyl sulfoxide + reduced 2,6-dichlorophenolindophenol | - |
? | |
dimethyl sulfide + oxidized 2,6-dichlorophenolindophenol + H2O | - |
Rhodovulum sulfidophilum SH1 | dimethyl sulfoxide + reduced 2,6-dichlorophenolindophenol | - |
? |
Subunits | Comment | Organism |
---|---|---|
heterotrimer | 1 * 94000 + 1 * 38000 + 1 * 32000 | Rhodovulum sulfidophilum |
Synonyms | Comment | Organism |
---|---|---|
DdhA | subunit | Rhodovulum sulfidophilum |
DdhB | subunit | Rhodovulum sulfidophilum |
DdhC | subunit | Rhodovulum sulfidophilum |
dimethyl sulphide dehydrogenase | - |
Rhodovulum sulfidophilum |
DMS dehydrogenase | - |
Rhodovulum sulfidophilum |
DMS DH | - |
Rhodovulum sulfidophilum |
Cofactor | Comment | Organism | Structure |
---|---|---|---|
molybdopterin | bis(molybdopterin guanine dinucleotide)Mo | Rhodovulum sulfidophilum | |
[3Fe-4S]-center | subunit DdhB binds one 3Fe-4S cluster | Rhodovulum sulfidophilum |
General Information | Comment | Organism |
---|---|---|
malfunction | the ddhA mutant is not able to grow photoautotrophically with dimethyl sulfide as electron donor, although photoheterotrophic growth is not impaired | Rhodovulum sulfidophilum |
physiological function | dimethyl sulfide dehydrogenase is essential for photolithotrophic growth of Rhodovulum sulfidophilum on dimethyl sulfide but not for chemo-trophic growth on the same substrate | Rhodovulum sulfidophilum |