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Literature summary for 1.3.5.2 extracted from

  • Fagan, R.L.; Nelson, M.N.; Pagano, P.M.; Palfey, B.A.
    Mechanism of flavin reduction in class 2 dihydroorotate dehydrogenases (2006), Biochemistry, 45, 14926-14932.
    View publication on PubMed

Application

Application Comment Organism
additional information kinetic isotope effects on flavin reduction in anaerobic stopped-flow experiments, are about 3fold for DHO labeled at the 5-position, about 4fold for DHO labeled at the 6-position, and about 6-7fold for DHO labeled at both the 5- and 6-positions, at a pH value above the pKa controlling reduction, no isotope effect was observed for DHO deuterated at the 5-position, which is consistent with a stepwise reaction, above the kinetic pKa, the deprotonation of C5 is fast enough that it does not contribute to the observed rate constant and, therefore, is not isotopically sensitive Escherichia coli
additional information kinetic isotope effects on flavin reduction in anaerobic stopped-flow experiments, pKa near 9.4 controlling reduction, similar to that previously reported for the Escherichia coli enzyme Homo sapiens

Cloned(Commentary)

Cloned (Comment) Organism
-
Escherichia coli
-
Homo sapiens

Organism

Organism UniProt Comment Textmining
Escherichia coli
-
-
-
Homo sapiens
-
-
-

Purification (Commentary)

Purification (Comment) Organism
-
Escherichia coli
-
Homo sapiens

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
dihydroorotate + acceptor
-
Escherichia coli orotate + reduced acceptor
-
?
dihydroorotate + acceptor
-
Homo sapiens orotate + reduced acceptor
-
?

Synonyms

Synonyms Comment Organism
class 2 dihydroorotate dehydrogenases
-
Escherichia coli
class 2 dihydroorotate dehydrogenases
-
Homo sapiens
DHODH
-
Escherichia coli
DHODH
-
Homo sapiens

pH Range

pH Minimum pH Maximum Comment Organism
6 11.3 the rate constant for flavin reduction increases with pH Homo sapiens
6.5 8.5
-
Escherichia coli

Cofactor

Cofactor Comment Organism Structure
flavin
-
Escherichia coli
flavin
-
Homo sapiens