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Literature summary for 1.11.1.13 extracted from

  • Matsubara, M.; Suzuki, J.; Deguchi, T.; Miura, M.; Kitaoka, Y.
    Characterization of manganese peroxidases from the hyperlignolytic fungus IZU-154 (1996), Appl. Environ. Microbiol., 62, 4066-4072.
    View publication on PubMedView publication on EuropePMC

Application

Application Comment Organism
environmental protection
-
Phanerodontia chrysosporium
environmental protection degradation of recalcitrant high-molecular-mass compounds, such as nylon and melanin, degradation of xenobiotic compounds, bioremediation, decolorization of wastewater Deuteromycotina sp.
paper production
-
Phanerodontia chrysosporium
paper production biobleaching of kraft pulp Deuteromycotina sp.

Cloned(Commentary)

Cloned (Comment) Organism
isolation of the cDNAs encoding MnP isoenzymes: coding sequences of IZ-MnP1 cDNA with 1152 bp and IZ-MnP2 cDNA with 1155 bp in length, 2 copies of DNA encoding MnP isoenzymes exist in genomic DNA, 4 isoenzymes are generated as products of 2 genes by the difference of posttranslational modification Deuteromycotina sp.

Crystallization (Commentary)

Crystallization (Comment) Organism
crystal structure Phanerodontia chrysosporium

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.0447
-
Mn2+
-
Deuteromycotina sp.
0.0537
-
Mn2+
-
Phanerodontia chrysosporium

Localization

Localization Comment Organism GeneOntology No. Textmining
extracellular
-
Phanerodontia chrysosporium
-
-
extracellular
-
Deuteromycotina sp.
-
-

Metals/Ions

Metals/Ions Comment Organism Structure
Ca2+ MnP has 2 structural calcium ions Phanerodontia chrysosporium
Ca2+ MnP has 2 structural calcium ions Deuteromycotina sp.

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
43000
-
x * 43000, SDS-PAGE Deuteromycotina sp.

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
Mn2+ + H+ + H2O2 Phanerodontia chrysosporium important component of lignin degradation system Mn3+ + H2O
-
?
Mn2+ + H+ + H2O2 Deuteromycotina sp. important component of lignin degradation system Mn3+ + H2O
-
?
Mn2+ + H+ + H2O2 Phanerodontia chrysosporium ME446 important component of lignin degradation system Mn3+ + H2O
-
?

Organism

Organism UniProt Comment Textmining
Deuteromycotina sp.
-
fungi IZU-154, FERM BP-1859, hyperlignolytic fungus IZU-154, belongs to the family Deuteromycotina and is deposited as the strain name of NK-1148, 4 isoenzymes
-
Phanerodontia chrysosporium
-
-
-
Phanerodontia chrysosporium
-
white rot basidomycete
-
Phanerodontia chrysosporium ME446
-
-
-

Posttranslational Modification

Posttranslational Modification Comment Organism
glycoprotein Asn-130 follows general rule of the N-glycosylation site Deuteromycotina sp.
glycoprotein with 3 potential N-glycosylation sites, but only Asn-131 binds to carbohydrate Phanerodontia chrysosporium
proteolytic modification leader sequence at the N-terminus Phanerodontia chrysosporium
proteolytic modification leader sequence at the N-terminus: first 24 amino acids possess characteristics of signal peptides Deuteromycotina sp.

Purification (Commentary)

Purification (Comment) Organism
-
Phanerodontia chrysosporium
-
Deuteromycotina sp.

Specific Activity [micromol/min/mg]

Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
additional information
-
-
Phanerodontia chrysosporium
additional information
-
-
Deuteromycotina sp.

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
Mn2+ + H+ + H2O2
-
Deuteromycotina sp. Mn3+ + H2O product Mn3+ possibly migrates into polymer molecules, such as lignin, nylon and melanin, and initiates nonspecific oxidation ?
Mn2+ + H+ + H2O2
-
Phanerodontia chrysosporium Mn3+ + H2O Mn3+ oxidizes 2,6-dimethoxyphenol ?
Mn2+ + H+ + H2O2
-
Deuteromycotina sp. Mn3+ + H2O Mn3+ oxidizes 2,6-dimethoxyphenol ?
Mn2+ + H+ + H2O2 important component of lignin degradation system Phanerodontia chrysosporium Mn3+ + H2O
-
?
Mn2+ + H+ + H2O2 important component of lignin degradation system Deuteromycotina sp. Mn3+ + H2O
-
?
Mn2+ + H+ + H2O2
-
Phanerodontia chrysosporium ME446 Mn3+ + H2O Mn3+ oxidizes 2,6-dimethoxyphenol ?
Mn2+ + H+ + H2O2 important component of lignin degradation system Phanerodontia chrysosporium ME446 Mn3+ + H2O
-
?
additional information structural properties Phanerodontia chrysosporium ?
-
?
additional information structural properties Deuteromycotina sp. ?
-
?
additional information structural properties Phanerodontia chrysosporium ME446 ?
-
?

Subunits

Subunits Comment Organism
?
-
Phanerodontia chrysosporium
? x * 43000, SDS-PAGE Deuteromycotina sp.

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
30
-
assay at Phanerodontia chrysosporium
30
-
assay at Deuteromycotina sp.

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
125
-
Mn2+
-
Phanerodontia chrysosporium
161
-
Mn2+
-
Deuteromycotina sp.

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
additional information
-
-
Phanerodontia chrysosporium
additional information
-
4 isoenzymes: pI 5.1, 4.9, 4.5 and 3.7 Deuteromycotina sp.