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Literature summary for 1.1.1.343 extracted from

  • Huang, R.; Chen, H.; Zhong, C.; Kim, J.E.; Zhang, Y.H.
    High-throughput screening of coenzyme preference change of thermophilic 6-phosphogluconate dehydrogenase from NADP+ to NAD+ (2016), Sci. Rep., 6, 32644.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

Cloned (Comment) Organism
expressed in Escherichia coli TOP10 and BL21(DE3) cells Moorella thermoacetica

Protein Variants

Protein Variants Comment Organism
A30C/R31I/T32K the catalytic efficiency of the mutant for NAD+ is increased by about 1.6fold compared to the wild type enzyme Moorella thermoacetica
A30D/R31I/T32I the catalytic efficiency of the mutant for NAD+ is increased by 54fold, with a 4278fold reversal of coenzyme selectivity from NADP+ to NAD+ Moorella thermoacetica
A30E/R31I/T32D the catalytic efficiency of the mutant for NAD+ is increased by about 9.5fold compared to the wild type enzyme Moorella thermoacetica
R31I the catalytic efficiency of the mutant for NAD+ is increased by about 4.7fold compared to the wild type enzyme Moorella thermoacetica
R31I/T32G the catalytic efficiency of the mutant for NAD+ is increased by about 4fold compared to the wild type enzyme Moorella thermoacetica
R31T the catalytic efficiency of the mutant for NAD+ is increased by about 1.7fold compared to the wild type enzyme Moorella thermoacetica

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.01187
-
NAD+ mutant enzyme A30D/R31I/T32I, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
0.0404
-
NAD+ mutant enzyme A30C/R31I/T32K, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
0.127
-
NAD+ mutant enzyme A30E/R31I/T32D, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
0.354
-
NAD+ mutant enzyme R31I, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
0.362
-
NAD+ mutant enzyme R31I/T32K, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
0.605
-
NAD+ mutant enzyme R31T, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
1.397
-
NAD+ wild type enzyme, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
6-phospho-D-gluconate + NAD+ Moorella thermoacetica the wild type enzyme shows very low activity with NAD+, mutations at A30, R31, and T32 increase the catalytic activity with NAD+ D-ribulose 5-phosphate + CO2 + NADH + H+
-
?

Organism

Organism UniProt Comment Textmining
Moorella thermoacetica A0A1J5NX54
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
6-phospho-D-gluconate + NAD+ the wild type enzyme shows very low activity with NAD+, mutations at A30, R31, and T32 increase the catalytic activity with NAD+ Moorella thermoacetica D-ribulose 5-phosphate + CO2 + NADH + H+
-
?

Synonyms

Synonyms Comment Organism
6-phosphogluconate dehydrogenase
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Moorella thermoacetica
6PGDH
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Moorella thermoacetica

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
5.75
-
NAD+ mutant enzyme A30D/R31I/T32I, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
6
-
NAD+ mutant enzyme A30C/R31I/T32K, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
9.12
-
NAD+ mutant enzyme R31T, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
10.8
-
NAD+ mutant enzyme A30E/R31I/T32D, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
12.6
-
NAD+ wild type enzyme, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
12.94
-
NAD+ mutant enzyme R31I/T32K, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
15.01
-
NAD+ mutant enzyme R31I, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica

Cofactor

Cofactor Comment Organism Structure
NAD+
-
Moorella thermoacetica

kcat/KM [mM/s]

kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
9
-
NAD+ wild type enzyme, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
14.8
-
NAD+ mutant enzyme A30C/R31I/T32K, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
15
-
NAD+ mutant enzyme R31T, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
35.8
-
NAD+ mutant enzyme R31I/T32K, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
42.4
-
NAD+ mutant enzyme R31I, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
85.1
-
NAD+ mutant enzyme A30E/R31I/T32D, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica
484.2
-
NAD+ mutant enzyme A30D/R31I/T32I, in 100 mM HEPES (pH 7.5), at 50°C Moorella thermoacetica